RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNX17-207ENST00000489402 UBA6A0AVT1 1052 aaPredicted RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 BLACEA4D250 179 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TLCD2A6NGC4 264 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 AURKAO14965 403 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TPM3P06753 285 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 FECHP22830 423 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 SPAM1P38567 509 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 MLLT10P55197 1068 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 PPP1CAP62136 330 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 RPS15P62841 145 aaKnown RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 DYNLT1P63172 113 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 DMPKQ09013 629 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 SEMA5AQ13591 1074 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 ITGA9Q13797 1035 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 NOMO1Q15155 1222 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 PPP2R5EQ16537 467 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 UGT8Q16880 541 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TEX44Q53QW1 395 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 DNTTIP2Q5QJE6 756 aaKnown RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 PWWP2BQ6NUJ5 590 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 ARMC6Q6NXE6 501 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 NPNTQ6UXI9 565 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 BZW1Q7L1Q6 419 aaKnown RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 C11orf96Q7Z7L8 435 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TMEM135Q86UB9 458 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 APLFQ8IW19 511 aaPredicted RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 GPR150Q8NGU9 434 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 NAT14Q8WUY8 206 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 TADA1Q96BN2 335 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 SLC41A2Q96JW4 573 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 ZNF514Q96K75 400 aaPredicted RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 CD180Q99467 661 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 GPR87Q9BY21 358 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 AKIRIN1Q9H9L7 192 aaPredicted RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
SNX17-207ENST00000489402 UBP1Q9NZI7 540 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 HACD3Q9P035 362 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 SEMA5BQ9P283 1151 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 PSMD13Q9UNM6 376 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 SPO11Q9Y5K1 396 aa9.17□□□□□ -0.94
SNX17-207ENST00000489402 IGHV5-51A0A0C4DH38 117 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 C3orf70A6NLC5 250 aaPredicted RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 OR2AG2A6NM03 316 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 AKR1B10O60218 316 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 CPNE3O75131 537 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 POP7O75817 140 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 DNAJB5O75953 348 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 TIAF1O95411 115 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 EBLN1P0CF75 366 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 FOLR1P15328 257 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 PTPN3P26045 913 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 PTPN4P29074 926 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 AKT1P31749 480 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 HNRNPH3P31942 346 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 ARHGAP25P42331 645 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 NR2C2P49116 596 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 PGDP52209 483 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 HSD11B2P80365 405 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 XRCC4Q13426 336 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 KCNAB1Q14722 419 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 RPE65Q16518 533 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 TMTC4Q5T4D3 741 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 LRRC38Q5VT99 294 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 FAM151BQ6UXP7 276 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 GLT6D1Q7Z4J2 308 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 SYVN1Q86TM6 617 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 OOSP2Q86WS3 158 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 TMEM126BQ8IUX1 230 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 DDHD1Q8NEL9 900 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 OR8K5Q8NH50 307 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 SLC35G2Q8TBE7 412 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 DTX3LQ8TDB6 740 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 TFB1MQ8WVM0 346 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 TEKT5Q96M29 485 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 PSMG3-AS1Q96PY0 264 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 RUFY1Q96T51 708 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 MAP3K3Q99759 626 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 SLC25A23Q9BV35 468 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 IL26Q9NPH9 171 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 ACSS2Q9NR19 701 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 FGF21Q9NSA1 209 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 IMP3Q9NV31 184 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 ZNHIT6Q9NWK9 470 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 G3BP2Q9UN86 482 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 PKP3Q9Y446 797 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 PRRC2CQ9Y520 2896 aaKnown RBP9.16□□□□□ -0.94
SNX17-207ENST00000489402 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
SNX17-207ENST00000489402 GLYATL1P3A0A0U1RQE8 302 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms