RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CDH17Q12864 832 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 PTK2BQ14289 1009 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF234Q14588 700 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 HERC3Q15034 1050 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 PON2Q15165 354 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 MTX3Q5HYI7 312 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 NCEH1Q6PIU2 408 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 ZYG11AQ6WRX3 759 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 KLHDC8BQ8IXV7 354 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD1L-208ENST00000488864 FRS2Q8WU20 508 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 NAT9Q9BTE0 207 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 FAIMQ9NVQ4 179 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 CACNA2D2Q9NY47 1150 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 EBF1Q9UH73 591 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 HCN2Q9UL51 889 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 PCDHGA7Q9Y5G6 932 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 A0A0U1RQS6 177 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 E7ENX8 843 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 TMX2-CTNND1H3BSU7 103 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SUPT3HO75486 399 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 APODP05090 189 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 VARSP26640 1264 aaKnown RBP13.15□□□□□ -0.3
CHD1L-208ENST00000488864 PSME3P61289 254 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SNRPD1P62314 119 aaKnown RBP13.15□□□□□ -0.3
CHD1L-208ENST00000488864 POM121L1PQ3SYA9 428 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SIRPB2Q5JXA9 342 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 DHRS4L2Q6PKH6 230 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 Q6ZNX1 250 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 LINC00523Q86TU6 105 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 OR2A12Q8NGT7 310 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
CHD1L-208ENST00000488864 RMDN1Q96DB5 314 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 CIB1Q99828 191 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
CHD1L-208ENST00000488864 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF711Q9Y462 761 aa13.15□□□□□ -0.3
CHD1L-208ENST00000488864 SLC22A2O15244 555 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PHGDHO43175 533 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PSMD3O43242 534 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PRLP01236 227 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 RALGDSQ12967 914 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 CARD16Q5EG05 197 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 LIPMQ5VYY2 423 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 LPCAT1Q8NF37 534 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 FAM110BQ8TC76 370 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PPP1R14BQ96C90 147 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 OSBPL11Q9BXB4 747 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 C1QTNF1Q9BXJ1 281 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 BFARQ9NZS9 450 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 SNX13Q9Y5W8 968 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 ANKRD36A6QL64 1941 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 C8BP07358 591 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 TFPTP0C1Z6 253 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 IL12RB1P42701 662 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 GRM3Q14832 879 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 EIF4HQ15056 248 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 CYP2R1Q6VVX0 501 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 SMYD1Q8NB12 490 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 VOPP1Q96AW1 172 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 ISG20Q96AZ6 181 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 PPP1R2P1Q96PQ5 205 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 OSBPL6Q9BZF3 934 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 IL22Q9GZX6 179 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 NOL11Q9H8H0 719 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 IARS2Q9NSE4 1012 aaKnown RBP13.14□□□□□ -0.31
CHD1L-208ENST00000488864 FAM50BQ9Y247 325 aa13.14□□□□□ -0.31
CHD1L-208ENST00000488864 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SH3PXD2BA1X283 911 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SLC4A1P02730 911 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 UGT2B4P06133 528 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SRPRAP08240 638 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CKMT2P17540 419 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms