RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 HYAL3O43820 417 aaPredicted RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 OPA1O60313 960 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 UBE2IP63279 158 aaKnown RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 E2F1Q01094 437 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 DHX9Q08211 1270 aaKnown RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 FOXC1Q12948 553 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 AARS2Q5JTZ9 985 aaKnown RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 TAS2R42Q7RTR8 314 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 CHCHD4Q8N4Q1 142 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 OR6P1Q8NGX9 317 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 DCUN1D1Q96GG9 259 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 CCDC3Q9BQI4 270 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 SARS2Q9NP81 518 aaKnown RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 PRDM8Q9NQV8 689 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 SCHIP1Q9P0W5 487 aaPredicted RBP18.32■□□□□ 0.52
PTCD3-217ENST00000488801 SAMD15Q9P1V8 674 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 WHRNQ9P202 907 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 PCM1Q15154 2024 aa18.32■□□□□ 0.52
PTCD3-217ENST00000488801 MAP1BP46821 2468 aaKnown RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 KIR2DS5A0A0G2JLQ3 304 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 A0A0G2JNG1 304 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 C17orf113A0A1B0GUU1 675 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 CPED1A4D0V7 1026 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 OR5K4A6NMS3 321 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 KIR2DS3K7RE56 304 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 CASC3O15234 703 aaKnown RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 OR1I1O60431 355 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 BANF1O75531 89 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 VAPBO95292 243 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 GSTM1P09488 218 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 SLC2A4P14672 509 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 VCLP18206 1134 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 GSTM4Q03013 218 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 NFE2L1Q14494 772 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 KIR2DS5Q14953 304 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 FASTKD1Q53R41 847 aaKnown RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 METRNLQ641Q3 311 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 CLDN19Q8N6F1 224 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 KIF18AQ8NI77 898 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 HM13Q8TCT9 377 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 SEC14L1Q92503 715 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 ZNF592Q92610 1267 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 ZNF669Q96BR6 464 aaPredicted RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 STAMBPL1Q96FJ0 436 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 EBNA1BP2Q99848 306 aaKnown RBP18.31■□□□□ 0.52
PTCD3-217ENST00000488801 TRIM31Q9BZY9 425 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 DNAJC16Q9Y2G8 782 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 SNX24Q9Y343 169 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 NEUROG3Q9Y4Z2 214 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 RPS6KL1Q9Y6S9 549 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 ACACAQ13085 2346 aa18.31■□□□□ 0.52
PTCD3-217ENST00000488801 FRYQ5TBA9 3013 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 A0A1W2PQM1 296 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 QSOX1O00391 747 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 NDC80O14777 642 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 PPM1DO15297 605 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 PGAM1P18669 254 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 XRCC1P18887 633 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-217ENST00000488801 OGNP20774 298 aaKnown RBP18.3■□□□□ 0.52
PTCD3-217ENST00000488801 IDSP22304 550 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 TTPAP49638 278 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 PDX1P52945 283 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 CRYMQ14894 314 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
PTCD3-217ENST00000488801 HES3Q5TGS1 186 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 TMPRSS12Q86WS5 348 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 IGDCC3Q8IVU1 814 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 GALNT15Q8N3T1 639 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 MMGT1Q8N4V1 131 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 DCBLD1Q8N8Z6 715 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 BBOF1Q8ND07 529 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 WDR48Q8TAF3 677 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 MAPK15Q8TD08 544 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 LRRC39Q96DD0 335 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 PWWP2AQ96N64 755 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 SCNM1Q9BWG6 230 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 P2RY12Q9H244 342 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 OSGEPL1Q9H4B0 414 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 ZNF624Q9P2J8 865 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-217ENST00000488801 LRIT1Q9P2V4 623 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 KLK13Q9UKR3 277 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 WDR37Q9Y2I8 494 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 TEX264Q9Y6I9 313 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 FAM169AQ9Y6X4 670 aa18.3■□□□□ 0.52
PTCD3-217ENST00000488801 TCEA3O75764 348 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 PAMP19021 973 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 RPS3P23396 243 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■□□□ 12.1
PTCD3-217ENST00000488801 GPR3P46089 330 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 CLDN6P56747 220 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 HIF1AQ16665 826 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 CCDC157Q569K6 752 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 STEAP4Q687X5 459 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 LDB1Q86U70 411 aaPredicted RBP18.29■□□□□ 0.52
PTCD3-217ENST00000488801 PDIK1LQ8N165 341 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 LILRA3Q8N6C8 439 aaPredicted RBP18.29■□□□□ 0.52
PTCD3-217ENST00000488801 AVL9Q8NBF6 648 aa18.29■□□□□ 0.52
PTCD3-217ENST00000488801 LPGAT1Q92604 370 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms