RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 VCLP18206 1134 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ADRA1DP25100 572 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ACRV1P26436 265 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 MLLT3P42568 568 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 LMAN1P49257 510 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 LIMK2P53671 638 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 EPHA4P54764 986 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 CACNG1Q06432 222 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 C16orf72Q14CZ0 275 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ZNF658BQ4V348 819 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ZRANB3Q5FWF4 1079 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 TSTD2Q5T7W7 516 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 TMEM71Q6P5X7 295 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 GSTA5Q7RTV2 222 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 CLEC14AQ86T13 490 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 AVL9Q8NBF6 648 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 OR2L2Q8NH16 312 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ACTRT1Q8TDG2 376 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 HEXDCQ8WVB3 486 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ANP32BQ92688 251 aaKnown RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 MAGOHBQ96A72 148 aaKnown RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 COPS8Q99627 209 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 TBC1D10AQ9BXI6 508 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 SLC40A1Q9NP59 571 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 PYCARDQ9ULZ3 195 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 SNX12Q9UMY4 172 aa15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 ANKRD11Q6UB99 2663 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-209ENST00000488627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 TCRBV7S3A2A0A539 114 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 HEATR9A2RTY3 570 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 CCDC162PA2VCL2 907 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 OR51F1A6NGY5 319 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 LILRA5A6NI73 299 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 ZNF185O15231 689 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 ITGA2BP08514 1039 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 THRAP10827 490 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 ATP1B2P14415 290 aaPredicted RBP15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 RBMS1P29558 406 aaKnown RBP15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 FOXN2P32314 431 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 MAGEA6P43360 314 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 PRLHRP49683 370 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 DBN1Q16643 649 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 PHF19Q5T6S3 580 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 WDR74Q6RFH5 385 aaPredicted RBP15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 TMEM26Q6ZUK4 368 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 ZNF534Q76KX8 674 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 OR10G6Q8NH81 332 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 HDAC10Q969S8 669 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 TMEM159Q96B96 161 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 DCUN1D1Q96GG9 259 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 CCDC74BQ96LY2 380 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 DPYSL5Q9BPU6 564 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 STN1Q9H668 368 aaKnown RBP15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 THSD1Q9NS62 852 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 OGFRQ9NZT2 677 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 LOXL2Q9Y4K0 774 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 BPTFQ12830 3046 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 ZFHX4Q86UP3 3567 aa15.64■□□□□ 0.09
CTDSP1-209ENST00000488627 PGRMC1O00264 195 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 CES2O00748 559 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 GAS8O95995 478 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 VIPP01282 170 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 ITIH1P19827 911 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 MPSTP25325 297 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 MSNP26038 577 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 ITPKBP27987 946 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 PBLDP30039 288 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 COILP38432 576 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 ETV5P41161 510 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 BASP1P80723 227 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 CDK16Q00536 496 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 TRA2AQ13595 282 aaKnown RBP eCLIP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 LAMB3Q13751 1172 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 TRIP13Q15645 432 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 RPE65Q16518 533 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 FOXR1Q6PIV2 292 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 C19orf48Q6RUI8 117 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 TAS2R42Q7RTR8 314 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 RCBTB1Q8NDN9 531 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 HNRNPLLQ8WVV9 542 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 PEX13Q92968 403 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 SGSM3Q96HU1 749 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 DCBLD2Q96PD2 775 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 CMKLR1Q99788 373 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 PSMD13Q9UNM6 376 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 TCAF1Q9Y4C2 921 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 PCDHGA7Q9Y5G6 932 aa15.63■□□□□ 0.09
CTDSP1-209ENST00000488627 C17orf113A0A1B0GUU1 675 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 KLHL33A6NCF5 533 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 CFAP99D6REC4 459 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 AGRPO00253 132 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 HGSO14964 777 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 DUX1O43812 170 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 GOT2P00505 430 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 KRT14P02533 472 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 RALBP11234 206 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms