RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 GBP7Q8N8V2 638 aaPredicted RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 GIMAP7Q8NHV1 300 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CCT6BQ92526 530 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 PTERQ96BW5 349 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 FAM136AQ96C01 138 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ERLEC1Q96DZ1 483 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 PDLIM5Q96HC4 596 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 RMDN2Q96LZ7 410 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 BOCQ9BWV1 1114 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SPATA16Q9BXB7 569 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 HDAC8Q9BY41 377 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 KLHL42Q9P2K6 505 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 INVSQ9Y283 1065 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SPAG17Q6Q759 2223 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 A8MT66 165 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SPINT1O43278 529 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 KERAO60938 352 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SMIM24O75264 130 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 LYPLA1O75608 230 aaPredicted RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 TPBGLP0DKB5 382 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 HOXA6P31267 233 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 TIE1P35590 1138 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 HK2P52789 917 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 NAGLUP54802 743 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 CRY1Q16526 586 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ERN2Q76MJ5 926 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CYP2U1Q7Z449 544 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CHPFQ8IZ52 775 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 STAG3L4Q8TBR4 150 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 KCNV2Q8TDN2 545 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 INPP5DQ92835 1189 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SGF29Q96ES7 293 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ACOX2Q99424 681 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SLC30A3Q99726 388 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 TMEM120AQ9BXJ8 343 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 STN1Q9H668 368 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 KCNK13Q9HB14 408 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 NCKIPSDQ9NZQ3 722 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 GALPQ9UBC7 116 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 HAO1Q9UJM8 370 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 A0A0G2JND7 137 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 SYCE1LA8MT33 242 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 WNT9AO14904 365 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ADAM23O75077 832 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 TSPAN12O95859 305 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ARRB2P32121 409 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ETV3P41162 512 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 METAP1P53582 386 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 OR4D1Q15615 310 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 CCDC6Q16204 474 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 FBXO43Q4G163 708 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 WDR5BQ86VZ2 330 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 MMAAQ8IVH4 418 aaKnown RBP12.54□□□□□ -0.4
NELFE-209ENST00000488426 IL17RCQ8NAC3 791 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 COQ10AQ96MF6 247 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 VPS35Q96QK1 796 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 PANX3Q96QZ0 392 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ATOH8Q96SQ7 321 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 WWP1Q9H0M0 922 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 SARS2Q9NP81 518 aaKnown RBP12.54□□□□□ -0.4
NELFE-209ENST00000488426 LATS2Q9NRM7 1088 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ABCF3Q9NUQ8 709 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 NCDNQ9UBB6 729 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 TMCO1Q9UM00 188 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
NELFE-209ENST00000488426 IQCF5A8MTL0 148 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 MYO1CO00159 1063 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 MAGEC1O60732 1142 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 ATG13O75143 517 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 PSMD8P48556 350 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 RGS4P49798 205 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 LIG3P49916 1009 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 CREB5Q02930 508 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SPEM2Q0P670 501 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 PRKAA1Q13131 559 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ACOX1Q15067 660 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 TTLL9Q3SXZ7 439 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 CFAP157Q5JU67 520 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms