RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 KCTD14Q9BQ13 255 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 C17orf62Q9BQA9 187 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 KIFC1Q9BW19 673 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ACAT2Q9BWD1 397 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DNAI2Q9GZS0 605 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 NXF2Q9GZY0 626 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 MMP27Q9H306 513 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 WDR55Q9H6Y2 383 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZFP14Q9HCL3 533 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GPRC5CQ9NQ84 441 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 RPRD1BQ9NQG5 326 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP26B1Q9NR63 512 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 C1orf112Q9NSG2 853 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PAQR5Q9NXK6 330 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FBXL12Q9NXK8 326 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM216Q9P0N5 145 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ARHGAP28Q9P2N2 729 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 EIF3KQ9UBQ5 218 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 WARS2Q9UGM6 360 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GTF2IRD1Q9UHL9 959 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 BAG5Q9UL15 447 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 VPS4AQ9UN37 437 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 AP3M1Q9Y2T2 418 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ADGRA2Q96PE1 1338 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 A0A1W2PQ72 361 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 HMX3A6NHT5 357 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 C12orf71A8MTZ7 269 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF99A8MXY4 864 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 KCNU1A8MYU2 1149 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAM86B1E9PN63 330 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 H3BMM5 538 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 K7ENM7 598 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TOR1BO14657 336 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 MEIS2O14770 477 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF780AO75290 641 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 NDUFS2O75306 463 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CDK14O94921 469 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PRSS23O95084 383 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRIM16O95361 564 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SNAP29O95721 258 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SCG5P05408 212 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 APOA4P06727 396 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAM86B2P0C5J1 330 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 IL10P22301 178 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 KDELR1P24390 212 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 EEF1B2P24534 225 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DNAJB1P25685 340 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 IL1R2P27930 398 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ELK4P28324 431 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP2C18P33260 490 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SHMT2P34897 504 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 UGT2B10P36537 528 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 RPS5P46782 204 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 RAP1GAPP47736 663 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ETV1P50549 477 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ATP4BP51164 291 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 OR2B6P58173 313 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DEFA1P59665 94 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DEFA3P59666 94 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GTF2BQ00403 316 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 RALGDSQ12967 914 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FADDQ13158 208 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SEMA3BQ13214 749 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SNRNP35Q16560 246 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CARTPTQ16568 116 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 MSMPQ1L6U9 139 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 LEXMQ3ZCV2 418 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FNDC3BQ53EP0 1204 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 C2CD6Q53TS8 623 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PRR16Q569H4 304 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 Q5BKY6 102 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TOR2AQ5JU69 321 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GLRA4Q5JXX5 417 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GPATCH4Q5T3I0 446 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PRMT9Q6P2P2 845 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DNAJC24Q6P3W2 148 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 POMZP3Q6PJE2 187 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP2R1Q6VVX0 501 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GDPD3Q7L5L3 318 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 HDDC2Q7Z4H3 204 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 R3HCC1LQ7Z5L2 792 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 THNSL2Q86YJ6 484 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CCDC103Q8IW40 242 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SPACA3Q8IXA5 215 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 NIM1KQ8IY84 436 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 METTL4Q8N3J2 472 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM35BQ8NCS4 154 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CHDHQ8NE62 594 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SHCBP1Q8NEM2 672 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PSMA8Q8TAA3 256 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SETD6Q8TBK2 473 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAM110BQ8TC76 370 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZFAND1Q8TCF1 268 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 HDAC10Q969S8 669 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms