RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ZBTB26Q9HCK0 441 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 GPC6Q9Y625 555 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ERI2A8K979 691 aaKnown RBP13.57□□□□□ -0.24
COPS7B-221ENST00000488111 C2CD4DB7Z1M9 353 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 HDAC3O15379 428 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 INSIG1O15503 277 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 MBTPS2O43462 519 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ECI2O75521 394 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 SRCP12931 536 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 TYK2P29597 1187 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 GMPRP36959 345 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ATP1A4Q13733 1029 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 TRIM25Q14258 630 aaKnown RBP13.57□□□□□ -0.24
COPS7B-221ENST00000488111 PTK2BQ14289 1009 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 CERCAMQ5T4B2 595 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 IRAK1BP1Q5VVH5 260 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 NAPEPLDQ6IQ20 393 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ANKRD26P1Q6NSI1 321 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 SFTPA1Q8IWL2 248 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 ETFBKMTQ8IXQ9 262 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 TRUB1Q8WWH5 349 aaKnown RBP13.57□□□□□ -0.24
COPS7B-221ENST00000488111 SCUBE2Q9NQ36 999 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 CASS4Q9NQ75 786 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 SYBUQ9NX95 663 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 PCDHGC4Q9Y5F7 938 aa13.57□□□□□ -0.24
COPS7B-221ENST00000488111 TCRBV3S1A0A5B6 114 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GOLGA8TH3BQL2 631 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 AKAP10O43572 662 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 POLR2EP19388 210 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CR2P20023 1033 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MYF6P23409 242 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MPSTP25325 297 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 RPL10P27635 214 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SLC7A1P30825 629 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GKP32189 559 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GJA4P35212 333 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ADRA1AP35348 466 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SOX9P48436 509 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 BMXP51813 675 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ECT2LQ008S8 904 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 NSUN2Q08J23 767 aaKnown RBP eCLIP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CCDC97Q96F63 343 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CIB1Q99828 191 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MRPL40Q9NQ50 206 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 DEC1Q9P2X7 70 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ERGIC3Q9Y282 383 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SLC30A1Q9Y6M5 507 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ANTXRLA6NF34 631 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 NEMP1O14524 444 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 PSMD3O43242 534 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 TRIM13O60858 407 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CNOT3O75175 753 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SERPINF2P08697 491 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MLNP12872 115 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 BMP1P13497 986 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 TCN1P20061 433 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 TRAP1Q12931 704 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 HTR4Q13639 388 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 AAK1Q2M2I8 961 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 RGS21Q2M5E4 152 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 FGD3Q5JSP0 725 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 DENND5AQ6IQ26 1287 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SLC2A7Q6PXP3 512 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CES3Q6UWW8 571 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 KIAA0907Q7Z7F0 614 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 PLD6Q8N2A8 252 aaKnown RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 CPA6Q8N4T0 437 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 MFSD2AQ8NA29 543 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 NXPE3Q969Y0 559 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GATA5Q9BWX5 397 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 GIN1Q9NXP7 522 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SUN2Q9UH99 717 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 EVLQ9UI08 416 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-221ENST00000488111 SLC25A13Q9UJS0 675 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 RAP2CQ9Y3L5 183 aa13.56□□□□□ -0.24
COPS7B-221ENST00000488111 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 GRID2O43424 1007 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 PSME3P61289 254 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 CDH17Q12864 832 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 BNIP3Q12983 259 aa13.55□□□□□ -0.24
COPS7B-221ENST00000488111 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms