RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 GDAP1Q8TB36 358 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CCDC110Q8TBZ0 833 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 NAT14Q8WUY8 206 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 C9orf72Q96LT7 481 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 APOL2Q9BQE5 337 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SLC12A9Q9BXP2 914 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ASPSCR1Q9BZE9 553 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ZCCHC2Q9C0B9 1178 aaKnown RBP11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ZNF768Q9H5H4 540 aaKnown RBP11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 UGT1A7Q9HAW7 530 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 UGT1A10Q9HAW8 530 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 UGT1A8Q9HAW9 530 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 FKBPLQ9UIM3 349 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PKP3Q9Y446 797 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TMEM184BQ9Y519 407 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CAPN6Q9Y6Q1 641 aa11.01□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SPTBP11277 2137 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 AGAP14A8MT82 685 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 KCNN4O15554 427 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ANXA9O76027 345 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 VIPP01282 170 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 FAM87AP0C7U9 286 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TNNT3P45378 269 aaPredicted RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PPM1FP49593 454 aaPredicted RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ATP1A2P50993 1020 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 RWDD2BP57060 319 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 XIAPP98170 497 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 GTF2H3Q13889 308 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 NFE2L1Q14494 772 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TAF1AQ15573 450 aaPredicted RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 LDLRAP1Q5SW96 308 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CCDC181Q5TID7 509 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 DENND5AQ6IQ26 1287 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 DUS1LQ6P1R4 473 aaKnown RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TIPARPQ7Z3E1 657 aaKnown RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PRSS42Q7Z5A4 293 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PLXDC1Q8IUK5 500 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TRIM48Q8IWZ4 208 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CACNA2D3Q8IZS8 1091 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 BEND7Q8N7W2 519 aaPredicted RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 OR4K2Q8NGD2 314 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CALR3Q96L12 384 aaKnown RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SPATA13Q96N96 652 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TGM7Q96PF1 710 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TEFMQ96QE5 360 aaKnown RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 DESI2Q9BSY9 194 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 FBXO8Q9NRD0 319 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PACSIN2Q9UNF0 486 aaPredicted RBP11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 KCTD3Q9Y597 815 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PCM1Q15154 2024 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CCL22O00626 93 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 STX7O15400 261 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 DDX3YO15523 660 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 KIF1CO43896 1103 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SRP72O76094 671 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 STK17BO94768 372 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 IPO7O95373 1038 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ZNF28P17035 718 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ITGB6P18564 788 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 LPOP22079 712 aaPredicted RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 IDSP22304 550 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PBLDP30039 288 aaPredicted RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 AKT1P31749 480 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 GDF10P55107 478 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SH3BP2P78314 561 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 RPE65Q16518 533 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TBR1Q16650 682 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 BCL7AQ4VC05 210 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 FNBP1LQ5T0N5 605 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 KCTD11Q693B1 232 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CEACAM20Q6UY09 585 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 AMZ2Q86W34 360 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 RBM12BQ8IXT5 1001 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 NLGN4XQ8N0W4 816 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 IL22RA1Q8N6P7 574 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 NLGN4YQ8NFZ3 816 aaPredicted RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 OR13C4Q8NGS5 318 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 CXorf40BQ96DE9 158 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TBL1YQ9BQ87 522 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 PSMD13Q9UNM6 376 aa10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 R3HDM2Q9Y2K5 976 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TNRC6AQ8NDV7 1962 aaKnown RBP10.99□□□□□ -0.65
RAB11FIP3-210ENST00000487899 LOC101059948A0A1B0GTJ6 334 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TCRBV7S2A1N4TA0A589 114 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 B8ZZF3 427 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TOX3O15405 576 aaPredicted RBP10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 LDB2O43679 373 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 POP7O75817 140 aaKnown RBP10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 TJP3O95049 919 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 FTCDO95954 541 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 MTHFD1P11586 935 aaKnown RBP10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 VCLP18206 1134 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 HALP42357 657 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 SPARCL1Q14515 664 aa10.98□□□□□ -0.65
RAB11FIP3-210ENST00000487899 ZNF658BQ4V348 819 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms