RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TMEM8BA6NDV4 472 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 OR51F1A6NGY5 319 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PRR19A6NJB7 356 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 OR2AG2A6NM03 316 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 C2orf81A6NN90 581 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SRRM3A6NNA2 597 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 RHPN2P1A8MT19 583 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF185O15231 689 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 B4GAT1O43505 415 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 TLX3O43711 291 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 NUDT21O43809 227 aaKnown RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 KRT37O76014 449 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SRP72O76094 671 aaKnown RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 CDK14O94921 469 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 BRAFP15056 766 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF7P17097 686 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ALDH4A1P30038 563 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PBLDP30039 288 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 STIP1P31948 543 aaKnown RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 CSF2RBP32927 897 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ARSDP51689 593 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 B4GALNT1Q00973 533 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 TMEM115Q12893 351 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 NFATC2Q13469 925 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PEX6Q13608 980 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SPIDRQ14159 915 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SEPT7Q16181 437 aaKnown RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 CCNG2Q16589 344 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 LONRF2Q1L5Z9 754 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 INSCQ1MX18 579 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 AMZ1Q400G9 498 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 C3orf38Q5JPI3 329 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 NKAIN2Q5VXU1 208 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 DRICH1Q6PGQ1 229 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 XKR5Q6UX68 686 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 FAM83HQ6ZRV2 1179 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 DET1Q7L5Y6 550 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 LRRTM4Q86VH4 590 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PROSER1Q86XN7 944 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 TRAPPC5Q8IUR0 188 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF295-AS1Q8N0V1 137 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 CACTIN-AS1Q8N1I8 211 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SFRP1Q8N474 314 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SVOPQ8N4V2 548 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 BEND7Q8N7W2 519 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 CCDC89Q8N998 374 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF398Q8TD17 642 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 BRSK1Q8TDC3 778 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PPP1R2P1Q96PQ5 205 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 DEPDC7Q96QD5 511 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 GFM1Q96RP9 751 aaKnown RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 NUDT22Q9BRQ3 303 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 AP1M1Q9BXS5 423 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 FRMD8P1Q9BZ68 369 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-209ENST00000487244 LRRN3Q9H3W5 708 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 RMI1Q9H9A7 625 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SMOXQ9NWM0 555 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 TMEM9Q9P0T7 183 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 APPL1Q9UKG1 709 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SATB2Q9UPW6 733 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 JRKLQ9Y4A0 524 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 LOC400499M0QZD8 3231 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SDK2Q58EX2 2172 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 FAM208BQ5VWN6 2430 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TCRBV7S3A2A0A539 114 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 GPR89AB7ZAQ6 455 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 E7EVH7 732 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 KMOO15229 486 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 FANCGO15287 622 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SGTAO43765 313 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 VEGFDO43915 354 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 PPFIA2O75334 1257 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TCEA3O75764 348 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF189O75820 626 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SUN1O94901 812 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CRTAMO95727 393 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 APRTP07741 180 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 THBS1P07996 1170 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 GPR89BP0CG08 455 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 F3P13726 295 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 HGFP14210 728 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 RPL10P27635 214 aaKnown RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CD1CP29017 333 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 AKT1P31749 480 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 MC4RP32245 332 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 FDFT1P37268 417 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 VPS41P49754 854 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TERF1P54274 439 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 DRG2P55039 364 aaKnown RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 GABREP78334 506 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CRADDP78560 199 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CFHR1Q03591 330 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SEMA5AQ13591 1074 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ITGA9Q13797 1035 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 NR1D2Q14995 579 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 RTP5Q14D33 572 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TRIP13Q15645 432 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms