RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 ARFGAP1Q8N6T3 406 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 SPATA4Q8NEY3 305 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 FAM172AQ8WUF8 416 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 TEKT4Q8WW24 435 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 ALG14Q96F25 216 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 PGAP3Q96FM1 320 aaPredicted RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 PDXPQ96GD0 296 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 BARD1Q99728 777 aaKnown RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 ULBP3Q9BZM4 244 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 ING2Q9H160 280 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 ZWILCHQ9H900 591 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 APMAPQ9HDC9 416 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 MBNL1Q9NR56 388 aaKnown RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 AGPAT4Q9NRZ5 378 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 DDX56Q9NY93 547 aaKnown RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 TMEM9Q9P0T7 183 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 BLOC1S6Q9UL45 172 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 LRRC42Q9Y546 428 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 COPG1Q9Y678 874 aaKnown RBP8.37□□□□□ -1.07
APTX-228ENST00000486724 DGKBQ9Y6T7 804 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 JMJD1CQ15652 2540 aa8.37□□□□□ -1.07
APTX-228ENST00000486724 CHD5Q8TDI0 1954 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 ARGFXA6NJG6 315 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 F5H5T6 163 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 PGRMC1O00264 195 aaKnown RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 ZNF185O15231 689 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 KCNN4O15554 427 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 IGLV3-25P01717 112 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 NQO1P15559 274 aaKnown RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 TCF4P15884 667 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TACR2P21452 398 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 MIPP30301 263 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 ABL2P42684 1182 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 EIF3BP55884 814 aaKnown RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 DEUP1Q05D60 604 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 LTBQ06643 244 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 FOXM1Q08050 763 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 CUL1Q13616 776 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 CDO1Q16878 200 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 UGT8Q16880 541 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TSNAXIP1Q2TAA8 658 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 PLEKHN1Q494U1 663 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 RABGAP1LQ5R372 815 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 SEL1L2Q5TEA6 688 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 SYPL2Q5VXT5 272 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TMEM71Q6P5X7 295 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 ZNF517Q6ZMY9 492 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 DPY19L3Q6ZPD9 716 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 CYP4V2Q6ZWL3 525 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 TGIF2LYQ8IUE0 185 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TP53I13Q8NBR0 393 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 CHDHQ8NE62 594 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 EXD1Q8NHP7 514 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 ACTRT1Q8TDG2 376 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 C14orf79Q96F83 325 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 CHMP6Q96FZ7 201 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 WDR92Q96MX6 357 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 RAB3IPQ96QF0 476 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 PEBP4Q96S96 227 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TBCBQ99426 244 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 OSBPL1AQ9BXW6 950 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.36□□□□□ -1.07
APTX-228ENST00000486724 PDP2Q9P2J9 529 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 ATXN10Q9UBB4 475 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 SLC12A6Q9UHW9 1150 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 TTC7AQ9ULT0 858 aaPredicted RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 B3GNT3Q9Y2A9 372 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 FN1P02751 2386 aaKnown RBP8.36□□□□□ -1.07
APTX-228ENST00000486724 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
APTX-228ENST00000486724 IGHV1OR21-1A0A087WYE8 117 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 KIAA1324LA8MWY0 1029 aaPredicted RBP8.35□□□□□ -1.07
APTX-228ENST00000486724 K7ERQ8 282 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 PRPSAP2O60256 369 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 SKAP2O75563 359 aaPredicted RBP8.35□□□□□ -1.07
APTX-228ENST00000486724 ATP5HO75947 161 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 TM7SF2O76062 418 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
APTX-228ENST00000486724 MT-CO1P00395 513 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 F9P00740 461 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 APOEP02649 317 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 KRT1P04264 644 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 PYGMP11217 842 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 TFE3P19532 575 aaPredicted RBP8.35□□□□□ -1.07
APTX-228ENST00000486724 KLK2P20151 261 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 DRD4P21917 467 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 IL1R2P27930 398 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 PTPN7P35236 360 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 GJC1P36383 396 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 SKIV2L2P42285 1042 aaKnown RBP8.35□□□□□ -1.07
APTX-228ENST00000486724 RANBP1P43487 201 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 SEC24CP53992 1094 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 AIF1P55008 147 aa8.35□□□□□ -1.07
APTX-228ENST00000486724 COPS2P61201 443 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms