RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 OR1E3Q8WZA6 343 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 WDR92Q96MX6 357 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 ZIM3Q96PE6 472 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 NDNQ99608 321 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CCDC77Q9BR77 488 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 FGF22Q9HCT0 170 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 MTO1Q9Y2Z2 717 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 PRKAB1Q9Y478 270 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 SPTY2D1-AS1A0A0U1RR47 76 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 A0A1B0GVT2 93 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 OR2AG2A6NM03 316 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 CFAP99D6REC4 459 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SCAMP1O15126 338 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 VILLO15195 856 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 PFDN6O15212 129 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 HYAL3O43820 417 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 NUAK1O60285 661 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 DNAJC6O75061 913 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 TCEA3O75764 348 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 RALBP11234 206 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 PKMP14618 531 aaKnown RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 ITGB6P18564 788 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 RPS3P23396 243 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SLCO1A2P46721 670 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 AFF3P51826 1226 aaKnown RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 THOP1P52888 689 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 PGGT1BP53609 377 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 NXPH1P58417 271 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 TIAL1Q01085 375 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 ADGRD1Q6QNK2 874 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 MACC1Q6ZN28 852 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF547Q8IVP9 402 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 BEND7Q8N7W2 519 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 OR56A4Q8NGH8 313 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 LKAAEAR1Q8TD35 194 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SCARF2Q96GP6 870 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 RBBP8Q99708 897 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 AARSD1Q9BTE6 412 aaKnown RBP12.59□□□□□ -0.39
HDAC6-229ENST00000486665 CLPBQ9H078 707 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 RHOJQ9H4E5 214 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 CTNNAL1Q9UBT7 734 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 FETUBQ9UGM5 382 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SLC24A2Q9UI40 661 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 KLF15Q9UIH9 416 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 KLK13Q9UKR3 277 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 VPS9D1Q9Y2B5 631 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 MED16Q9Y2X0 877 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 PLEKHM1Q9Y4G2 1056 aa12.59□□□□□ -0.39
HDAC6-229ENST00000486665 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 SMIM23A6NLE4 172 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 CHUKO15111 745 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 GRID2O43424 1007 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 AP2A2O94973 939 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ESR1P03372 595 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 IVLP07476 585 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 INHBAP08476 426 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 GNSP15586 552 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 KELP23276 732 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 HTR1BP28222 390 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 GNPDA1P46926 289 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ADARP55265 1226 aaKnown RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 CDKN2DP55273 166 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 SRP54P61011 504 aaKnown RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 ZNF844Q08AG5 666 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 IFFO1Q0D2I5 559 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 OVGP1Q12889 678 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 BMPR2Q13873 1038 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 GTF2H3Q13889 308 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 KIF19Q2TAC6 998 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 HECTD2Q5U5R9 776 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 PTRHD1Q6GMV3 140 aaKnown RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 SLC23A3Q6PIS1 610 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 CRTC3Q6UUV7 619 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 HDXQ7Z353 690 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 RD3Q7Z3Z2 195 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.4
HDAC6-229ENST00000486665 CYP4X1Q8N118 509 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 FAM136AQ96C01 138 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 PDXPQ96GD0 296 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 VPS39Q96JC1 886 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 OLFM1Q99784 485 aa12.58□□□□□ -0.4
HDAC6-229ENST00000486665 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms