RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ZIM3Q96PE6 472 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 SMC6Q96SB8 1091 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 AGAP2Q99490 1192 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 RBBP8Q99708 897 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 TEX101Q9BY14 249 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 FUT8Q9BYC5 575 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 TXLNGYQ9BZA5 131 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 SLC13A1Q9BZW2 595 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 OR2AG1Q9H205 316 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 RHOJQ9H4E5 214 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 SYTL2Q9HCH5 934 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 FZD3Q9NPG1 666 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 CD93Q9NPY3 652 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 SPATS2LQ9NUQ6 558 aaKnown RBP6.87□□□□□ -1.31
UBR4-214ENST00000486515 SENP1Q9P0U3 644 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 SLC39A10Q9ULF5 831 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 GPR34Q9UPC5 381 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 WASF3Q9UPY6 502 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 VWA7Q9Y334 891 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 OR1A2Q9Y585 309 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 FREM2Q5SZK8 3169 aa6.87□□□□□ -1.31
UBR4-214ENST00000486515 ANKRD36A6QL64 1941 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 A0A087X1B8 175 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TRBV5-4A0A0C4DH59 114 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 A0A1B0GTW7 788 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 FAM95CA0A1B0GW59 222 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 OR2AG2A6NM03 316 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 FADS2P1A8MWK0 482 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TLR4O00206 839 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 IFRD1O00458 451 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 TNFRSF10CO14798 259 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TM4SF5O14894 197 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 SPINT1O43278 529 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 GRID2O43424 1007 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 KCNJ13O60928 360 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MTX2O75431 263 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TCEA3O75764 348 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 RASGRP1O95267 797 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 KCNK5O95279 499 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 S1PR4O95977 384 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 SHBGP04278 402 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 CFIP05156 583 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MPOP05164 745 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 IGHV4-34P06331 123 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 SYPP08247 313 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ITGA2BP08514 1039 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 HOXC4P09017 264 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 RPS3P23396 243 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBR4-214ENST00000486515 DGKAP23743 735 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PBLDP30039 288 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 IGFALSP35858 605 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TRIM23P36406 574 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 HALP42357 657 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MAPK9P45984 424 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 CCT5P48643 541 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ARRB1P49407 418 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 CDKN1CP49918 316 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 LIMK2P53671 638 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 CLDN2P57739 230 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 KIAA1024LP59773 190 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 SRP54P61011 504 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 RAB10P61026 200 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MPP1Q00013 466 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PPARDQ03181 441 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ILF3Q12906 894 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBR4-214ENST00000486515 KRT33BQ14525 404 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 EFTUD2Q15029 972 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBR4-214ENST00000486515 ELOCQ15369 112 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 DUOXA1Q1HG43 343 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 FAM83EQ2M2I3 478 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PMS2CLQ68D20 193 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 CNSTQ6PJW8 725 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ADGRD1Q6QNK2 874 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MACC1Q6ZN28 852 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 RFLNAQ6ZTI6 216 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PARGQ86W56 976 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TDRPQ86YL5 185 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 UNC5BQ8IZJ1 945 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MAML2Q8IZL2 1156 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 MYO1HQ8N1T3 1032 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 NKAPQ8N5F7 415 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 FRMD1Q8N878 549 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MFSD2AQ8NA29 543 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PLA2G15Q8NCC3 412 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 EPS8L3Q8TE67 593 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 ASZ1Q8WWH4 475 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ANKRD7Q92527 254 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ELMO1Q92556 727 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PIGKQ92643 395 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 KCNJ9Q92806 393 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 VOPP1Q96AW1 172 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TMEM159Q96B96 161 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 CCM2Q9BSQ5 444 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TMEM109Q9BVC6 243 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 NUSAP1Q9BXS6 441 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 VPS11Q9H270 941 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 OSGEPL1Q9H4B0 414 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms