RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ABCG8Q9H221 673 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 PCMTD2Q9NV79 361 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 VPS18Q9P253 973 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 CD84Q9UIB8 345 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 TMEM59LQ9UK28 342 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PCDHGC4Q9Y5F7 938 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PRAMEF11O60813 436 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 VIPP01282 170 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 ATP1A1P05023 1023 aaKnown RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 GABRB2P47870 512 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 SNX16P57768 344 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 FKBP3Q00688 224 aaKnown RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 GPR18Q14330 331 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 ZNF789Q5FWF6 425 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 FAM102AQ5T9C2 384 aaPredicted RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 TMEM198Q66K66 360 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 RPUSD3Q6P087 351 aaKnown RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 GFRALQ6UXV0 394 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 MEX3BQ6ZN04 569 aaKnown RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 BIVMQ86UB2 503 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 KMT5CQ86Y97 462 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 SYTL1Q8IYJ3 562 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 UMODL1-AS1Q8N2C9 162 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 AOPEPQ8N6M6 819 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 OR8K5Q8NH50 307 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 ADAMTS18Q8TE60 1221 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 AP2M1Q96CW1 435 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 CNDP1Q96KN2 507 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 MCCC1Q96RQ3 725 aaPredicted RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 MAP3K3Q99759 626 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 SCAND2PQ9GZW5 306 aaPredicted RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 SYNCQ9H7C4 482 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 SLC40A1Q9NP59 571 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 UBE2TQ9NPD8 197 aaPredicted RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 KCND1Q9NSA2 647 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 P4HTMQ9NXG6 502 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 CNOT6Q9ULM6 557 aaKnown RBP8.06□□□□□ -1.12
XRN1-212ENST00000486211 SIK3Q9Y2K2 1263 aa8.06□□□□□ -1.12
XRN1-212ENST00000486211 CNTRLQ7Z7A1 2325 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 IGHEP01854 428 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 BRAFP15056 766 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 IGFBP2P18065 325 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 HADHAP40939 763 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 ME1P48163 572 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 ARCN1P48444 511 aaKnown RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 HSD11B2P80365 405 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 ATP11AP98196 1134 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 NSUN2Q08J23 767 aaKnown RBP eCLIP8.05□□□□□ -1.12
XRN1-212ENST00000486211 SSPNQ14714 243 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PRKD1Q15139 912 aaPredicted RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 LONRF1Q17RB8 773 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PTCHD3Q3KNS1 767 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 TMEM207Q6UWW9 146 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PPP1R32Q7Z5V6 425 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PHYKPLQ8IUZ5 450 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 TMEM151BQ8IW70 566 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PYROXD2Q8N2H3 581 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 CCDC185Q8N715 623 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 CPT1BQ92523 772 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 CCDC47Q96A33 483 aaKnown RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 ZNF396Q96N95 335 aaPredicted RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 GBP5Q96PP8 586 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 LRRC19Q9H756 370 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 RMI1Q9H9A7 625 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 PLCB1Q9NQ66 1216 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 CCM2LQ9NUG4 571 aaPredicted RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 POT1Q9NUX5 634 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 NOP53Q9NZM5 478 aaKnown RBP8.05□□□□□ -1.12
XRN1-212ENST00000486211 SH3BGRL2Q9UJC5 107 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 HPSEQ9Y251 543 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 DOCK10Q96BY6 2186 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 SPTBP11277 2137 aa8.05□□□□□ -1.12
XRN1-212ENST00000486211 NUP210LQ5VU65 1888 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 PEX12O00623 359 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 LDB2O43679 373 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 UNC5CO95185 931 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 LCA5LO95447 670 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 ASMTLO95671 621 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 CPP00450 1065 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 CYP2A6P11509 494 aaPredicted RBP8.04□□□□□ -1.12
XRN1-212ENST00000486211 PFKFB1P16118 471 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 MST1P26927 711 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 EPHB2P29323 1055 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 PRCPP42785 496 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 SMSP52788 366 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 AP1S1P61966 158 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 CETN1Q12798 172 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 C15orf59Q2T9L4 293 aaPredicted RBP8.04□□□□□ -1.12
XRN1-212ENST00000486211 C2CD6Q53TS8 623 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 GJB7Q6PEY0 223 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 ARCQ7LC44 396 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 TRIM48Q8IWZ4 208 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 EMC1Q8N766 993 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 PAF1Q8N7H5 531 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 CATSPER1Q8NEC5 780 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 EXD1Q8NHP7 514 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 NINJ1Q92982 152 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms