RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 STK32CQ86UX6 486 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 DEFB106AQ8N104 65 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 MMP21Q8N119 569 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 NAGSQ8N159 534 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 RBMXL3Q8N7X1 1067 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 PLA2G15Q8NCC3 412 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 OR2AP1Q8NGE2 309 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PNPLA2Q96AD5 504 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 FUBP1Q96AE4 644 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 SNRNP40Q96DI7 357 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 SLC2A13Q96QE2 648 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ULBP3Q9BZM4 244 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 THAP9Q9H5L6 903 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ANLNQ9NQW6 1124 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ASF1BQ9NVP2 202 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 SIDT1Q9NXL6 827 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 TAAR2Q9P1P5 351 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ZNF212Q9UDV6 495 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 COQ4Q9Y3A0 265 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PCDHB4Q9Y5E5 795 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PCDHGA6Q9Y5G7 932 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 SEC16AO15027 2179 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 DCHS2Q6V1P9 2916 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 IGLV3-10A0A075B6K4 115 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ZSCAN5CA6NGD5 496 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 DRGXA6NNA5 263 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 POLR1CO15160 346 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 STX10O60499 249 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ZG16O60844 167 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 POP4O95707 220 aaKnown RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 HOXC4P09017 264 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 SPTBP11277 2137 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 KELP23276 732 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ITGA3P26006 1051 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 AK4P27144 223 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 HOXC12P31275 282 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 BCL6P41182 706 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 STAT1P42224 750 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 CCL11P51671 97 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 PER3P56645 1201 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 RNASE9P60153 205 aaKnown RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 SNRPD1P62314 119 aaKnown RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 GNA12Q03113 381 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ELP6Q0PNE2 266 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 LRMPQ12912 555 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 NME3Q13232 169 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 RAPGEF1Q13905 1077 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 POLD3Q15054 466 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 STK38Q15208 465 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 MYLK3Q32MK0 819 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ATXN7L2Q5T6C5 722 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 OTUD1Q5VV17 481 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 C6orf15Q6UXA7 325 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 ZNF783Q6ZMS7 281 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 TMEM110Q86TL2 294 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 SLC47A2Q86VL8 602 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ZNF227Q86WZ6 799 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 LINC00301Q8NCQ3 95 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 DIO2Q92813 273 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 ARHGEF2Q92974 986 aaKnown RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 MED15Q96RN5 788 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 GSDMCQ9BYG8 508 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 TMPRSS5Q9H3S3 457 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 SUDS3Q9H7L9 328 aaPredicted RBP6.54□□□□□ -1.36
SMC4-217ENST00000485867 ARHGEF38Q9NXL2 777 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 MOSPD1Q9UJG1 213 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 FBXL7Q9UJT9 491 aa6.54□□□□□ -1.36
SMC4-217ENST00000485867 RTTNQ86VV8 2226 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 CXorf51AA0A1B0GTR3 108 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 MROH6A6NGR9 719 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ARGFXA6NJG6 315 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 SMAD7O15105 426 aaKnown RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 GRAP2O75791 330 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 CEACAM4O75871 244 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 RHOBTB3O94955 611 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 CASP14P31944 242 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 PTGER4P35408 488 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 TRIM23P36406 574 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ACVRL1P37023 503 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 MMP12P39900 470 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 SUOXP51687 545 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ILF3Q12906 894 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC4-217ENST00000485867 ADAM9Q13443 819 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 UGT8Q16880 541 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ZCWPW2Q504Y3 356 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 SLC30A9Q6PML9 568 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 WDR74Q6RFH5 385 aaPredicted RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 LRRC31Q6UY01 552 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 HPS6Q86YV9 775 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 IQCKQ8N0W5 287 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 LGI4Q8N135 537 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 PELI3Q8N2H9 469 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 OR10G6Q8NH81 332 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 CT55Q8WUE5 264 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 THAP4Q8WY91 577 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 KAT5Q92993 513 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 STAMBPL1Q96FJ0 436 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 HMCESQ96FZ2 354 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms