RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZNF711Q9Y462 761 aa12.76□□□□□ -0.37
HDAC6-227ENST00000485102 ITPR2Q14571 2701 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 UTP20O75691 2785 aaKnown RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 TTLL8A6PVC2 850 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 NRDCO43847 1150 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 CEACAM4O75871 244 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 NDST3O95803 873 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 FOLR1P15328 257 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 CDC25BP30305 580 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 HALP42357 657 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 DRG2P55039 364 aaKnown RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 TUBB3Q13509 450 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 SEPT7Q16181 437 aaKnown RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 ZDHHC20Q5W0Z9 365 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 IRGCQ6NXR0 463 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 FAM92BQ6ZTR7 304 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 HPS6Q86YV9 775 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 SIDT2Q8NBJ9 832 aaKnown RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 RAPGEF5Q92565 580 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 ZNF514Q96K75 400 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 LRFN5Q96NI6 719 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 TRIM55Q9BYV6 548 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 TRABDQ9H4I3 376 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 AKIRIN1Q9H9L7 192 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 LATS2Q9NRM7 1088 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 FGF21Q9NSA1 209 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 IMPACTQ9P2X3 320 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-227ENST00000485102 CAPN11Q9UMQ6 739 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 WDR37Q9Y2I8 494 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 MAP4K5Q9Y4K4 846 aa12.75□□□□□ -0.37
HDAC6-227ENST00000485102 POLEQ07864 2286 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TNRC6AQ8NDV7 1962 aaKnown RBP12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TLCD2A6NGC4 264 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 MTX2O75431 263 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 SORBS2O94875 1100 aaKnown RBP12.74□□□□□ -0.37
HDAC6-227ENST00000485102 EPOP01588 193 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 H2AFZP0C0S5 128 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 PIRTP0C851 137 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
HDAC6-227ENST00000485102 RPS15P62841 145 aaKnown RBP12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TUBB4BP68371 445 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TUBB2AQ13885 445 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 PDK1Q15118 436 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 RPE65Q16518 533 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 PLA2G4EQ3MJ16 856 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 IZUMO3Q5VZ72 239 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 CCDC70Q6NSX1 233 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 H2AFVQ71UI9 128 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 AMZ2Q86W34 360 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 CPNE8Q86YQ8 564 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 ADAMTS17Q8TE56 1095 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 SLC25A23Q9BV35 468 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 TUBB2BQ9BVA1 445 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 IL26Q9NPH9 171 aa12.74□□□□□ -0.37
HDAC6-227ENST00000485102 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
HDAC6-227ENST00000485102 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 KLHL33A6NCF5 533 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 C3orf70A6NLC5 250 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 AURKAO14965 403 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 CPNE3O75131 537 aaKnown RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 DNAJB5O75953 348 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 AGFG2O95081 481 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 ZFXP17010 805 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 GNLYP22749 145 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 HNRNPH3P31942 346 aaKnown RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 PGDP52209 483 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 HSD11B2P80365 405 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 PDE1BQ01064 536 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 AP1B1Q10567 949 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 GTF2H3Q13889 308 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 METRNLQ641Q3 311 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 TRAPPC5Q8IUR0 188 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 OR8K1Q8NGG5 319 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 ZNF501Q96CX3 271 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 AGAP3Q96P47 875 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 MAP3K3Q99759 626 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
HDAC6-227ENST00000485102 ING2Q9H160 280 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 KCND1Q9NSA2 647 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 IL17CQ9P0M4 197 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 CTTNBP2NLQ9P2B4 639 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
HDAC6-227ENST00000485102 CENPEQ02224 2701 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 OR5K3A6NET4 321 aa12.72□□□□□ -0.37
HDAC6-227ENST00000485102 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
HDAC6-227ENST00000485102 ZBTB11O95625 1053 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms