RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SIGLEC10Q96LC7 697 aa17.47■□□□□ 0.39
SREBF1-213ENST00000485080 C16orf45Q96MC5 204 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-213ENST00000485080 TMEM121BQ9BXQ6 578 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-213ENST00000485080 LRRN3Q9H3W5 708 aa17.47■□□□□ 0.39
SREBF1-213ENST00000485080 PRDM8Q9NQV8 689 aa17.47■□□□□ 0.39
SREBF1-213ENST00000485080 ACSL5Q9ULC5 683 aa17.47■□□□□ 0.39
SREBF1-213ENST00000485080 APC2O95996 2303 aa17.47■□□□□ 0.39
SREBF1-213ENST00000485080 COL27A1Q8IZC6 1860 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 A0A1W2PQM1 296 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 OR51F1A6NGY5 319 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 RHPN2P1A8MT19 583 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 TTI1O43156 1089 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 BRAFP15056 766 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 SPINK2P20155 84 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 ARNTP27540 789 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 ARCN1P48444 511 aaKnown RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 PLA2G4EQ3MJ16 856 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 FASTKD1Q53R41 847 aaKnown RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 XKR5Q6UX68 686 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 RBM44Q6ZP01 1051 aaKnown RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 MAATS1Q7Z4T9 603 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 SLC9B2Q86UD5 537 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 BEND7Q8N7W2 519 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 HM13Q8TCT9 377 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 GATA6Q92908 595 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 TRIM44Q96DX7 344 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 MFSD3Q96ES6 412 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 CCDC97Q96F63 343 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 DEPDC7Q96QD5 511 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 KRT12Q99456 494 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 OSGEPL1Q9H4B0 414 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 CPNE7Q9UBL6 633 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 CDC23Q9UJX2 597 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 DNAJC16Q9Y2G8 782 aa17.46■□□□□ 0.39
SREBF1-213ENST00000485080 ANKRD11Q6UB99 2663 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 MAP1BP46821 2468 aaKnown RBP17.46■□□□□ 0.39
SREBF1-213ENST00000485080 FAM187AA6NFU0 413 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 NDC80O14777 642 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 CD3EAPO15446 510 aaKnown RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 B4GAT1O43505 415 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 SNX2O60749 519 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 TTPAP49638 278 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 CCL7P80098 99 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 TARDBPQ13148 414 aaKnown RBP eCLIP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 IZUMO3Q5VZ72 239 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 DET1Q7L5Y6 550 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 RBM12BQ8IXT5 1001 aaKnown RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 GPR150Q8NGU9 434 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 CCM2Q9BSQ5 444 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 STN1Q9H668 368 aaKnown RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 CATSPERZQ9NTU4 200 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 SCHIP1Q9P0W5 487 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 SAMD15Q9P1V8 674 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 ZNF624Q9P2J8 865 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-213ENST00000485080 DMXL2Q8TDJ6 3036 aa17.45■□□□□ 0.38
SREBF1-213ENST00000485080 F8W8V4 182 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TMX2-CTNND1H3BSU7 103 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TP73O15350 636 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 USP1O94782 785 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 SEC31AO94979 1220 aaKnown RBP17.44■□□□□ 0.38
SREBF1-213ENST00000485080 RPLP0P05388 317 aaKnown RBP17.44■□□□□ 0.38
SREBF1-213ENST00000485080 PAMP19021 973 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 SLC19A1P41440 591 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TERF1P54274 439 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 EPHA4P54764 986 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 GPLD1P80108 840 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 HHEXQ03014 270 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 RPA4Q13156 261 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 BIRC2Q13490 618 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TUBB2AQ13885 445 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 SPIDRQ14159 915 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 NFE2L1Q14494 772 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 ISXQ2M1V0 245 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 ANKRD20A4Q4UJ75 823 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 HIBCHQ6NVY1 386 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-213ENST00000485080 MICALCLQ6ZW33 695 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 AGGF1Q8N302 714 aaeCLIP17.44■□□□□ 0.38
SREBF1-213ENST00000485080 CLDN19Q8N6F1 224 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 SNF8Q96H20 258 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TCF12Q99081 682 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 DPYSL5Q9BPU6 564 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 NAT9Q9BTE0 207 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 TUBB2BQ9BVA1 445 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-213ENST00000485080 NRSN2Q9GZP1 204 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 EPB41L1Q9H4G0 881 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 POT1Q9NUX5 634 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 ANAPC5Q9UJX4 755 aa17.44■□□□□ 0.38
SREBF1-213ENST00000485080 FAM149AA5PLN7 773 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 LILRA5A6NI73 299 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 PDZK1P1A8MUH7 402 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 D6RAR5 112 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 VAPBO95292 243 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 CD1CP29017 333 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 HALP42357 657 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 CLDN6P56747 220 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms