RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 TUBE1Q9UJT0 475 aa4.38□□□□□ -1.71
XPA-203ENST00000485042 DBNLQ9UJU6 430 aaKnown RBP4.38□□□□□ -1.71
XPA-203ENST00000485042 BTBD3Q9Y2F9 522 aa4.38□□□□□ -1.71
XPA-203ENST00000485042 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
XPA-203ENST00000485042 PCDHGA5Q9Y5G8 931 aa4.38□□□□□ -1.71
XPA-203ENST00000485042 FLT1P17948 1338 aa4.38□□□□□ -1.71
XPA-203ENST00000485042 SBF1O95248 1867 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 BRCA1P38398 1863 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 EDDM13A0A1B0GTR0 161 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 ZNF814B7Z6K7 855 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 H0YIN7 160 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 OVOL3O00110 214 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 ITM2AO43736 263 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 ATG13O75143 517 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 KCNK5O95279 499 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SLU7O95391 586 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 TGDSO95455 350 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 C22orf31O95567 290 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 TRUB2O95900 331 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 NUDT3O95989 172 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 EGFP01133 1207 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 GH2P01242 217 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 IFNA2P01563 188 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 ATP5BP06576 529 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 VPREB1P12018 145 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 PRLRP16471 622 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 DDX5P17844 614 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 RAB28P51157 221 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 DDR1Q08345 913 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 MTX1Q13505 466 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SUPT20HL1Q3ZLR7 823 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 CBWD6Q4V339 395 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 CBWD3Q5JTY5 395 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 TMEM211Q6ICI0 200 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SLC2A7Q6PXP3 512 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 PARM1Q6UWI2 310 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 PET117Q6UWS5 81 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 B3GNT6Q6ZMB0 384 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 YTHDF3Q7Z739 585 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 LDB1Q86U70 411 aaPredicted RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 MIGA1Q8NAN2 632 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SETD6Q8TBK2 473 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 HM13Q8TCT9 377 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 DEPDC1BQ8WUY9 529 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 DPF1Q92782 380 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 HDAC11Q96DB2 347 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 APOLD1Q96LR9 279 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 SH3GL2Q99962 352 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 CITED2Q99967 270 aaPredicted RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 DESI2Q9BSY9 194 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 HGH1Q9BTY7 390 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 NUP85Q9BW27 656 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 R3HDMLQ9H3Y0 253 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 KCNK15Q9H427 330 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 FZD3Q9NPG1 666 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 HAO2Q9NYQ3 351 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 LARSQ9P2J5 1176 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 C4BP0C0L5 1744 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 ADCY9O60503 1353 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 NSD2O96028 1365 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 KTN1Q86UP2 1357 aaKnown RBP4.37□□□□□ -1.71
XPA-203ENST00000485042 KIF13BQ9NQT8 1826 aa4.37□□□□□ -1.71
XPA-203ENST00000485042 PKD1L3Q7Z443 1732 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 TMEM272A0A1B0GTI8 110 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 ARHGEF37A1IGU5 675 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 EIF4E1BA6NMX2 242 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 H0Y626 953 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 PSMA7O14818 248 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 WDR46O15213 610 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 LDB2O43679 373 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 CNOT3O75175 753 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 SLCO2B1O94956 709 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 DNASE1P24855 282 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 CALRP27797 417 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 CCR10P46092 362 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 COMPP49747 757 aaPredicted RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 ENTPD1P49961 510 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 RAD23BP54727 409 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 SELENOVP59797 346 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 CSNK2A1P68400 391 aaPredicted RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 MAD2L1Q13257 205 aaPredicted RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 MYBPC2Q14324 1141 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 FAM98BQ52LJ0 330 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 WASHC2DQ5SRD0 308 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 ARMC4Q5T2S8 1044 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 DCAF12L2Q5VW00 463 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 CAVIN1Q6NZI2 390 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 PCSK4Q6UW60 755 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 INTS8Q75QN2 995 aaKnown RBP4.36□□□□□ -1.71
XPA-203ENST00000485042 TRAPPC11Q7Z392 1133 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 RD3Q7Z3Z2 195 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 ADCK2Q7Z695 626 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 FBXO39Q8N4B4 442 aa4.36□□□□□ -1.71
XPA-203ENST00000485042 PI4KAP1Q8N8J0 262 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms