RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GPR26Q8NDV2 337 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 OR4D9Q8NGE8 314 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 C9orf43Q8TAL5 461 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 BLOC1S5Q8TDH9 187 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 GRK7Q8WTQ7 553 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 PEX13Q92968 403 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 GLYATL1Q969I3 302 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 AHCYL2Q96HN2 611 aaKnown RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SMIM14Q96QK8 99 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CTRCQ99895 268 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SPATA16Q9BXB7 569 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 ZCCHC2Q9C0B9 1178 aaKnown RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 GPN2Q9H9Y4 310 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 TRIM39Q9HCM9 518 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 KCNK4Q9NYG8 393 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 TMEM9Q9P0T7 183 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 RNF14Q9UBS8 474 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 ANAPC2Q9UJX6 822 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SUFUQ9UMX1 484 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SPO11Q9Y5K1 396 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 IGHV1OR21-1A0A087WYE8 117 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 GLYATL1P3A0A0U1RQE8 302 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 KLHL33A6NCF5 533 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 FADS2P1A8MWK0 482 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 H7C0S8 307 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 AURKAO14965 403 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 KCNJ13O60928 360 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 SLC25A14O95258 325 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PIRTP0C851 137 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PSMA3P25788 255 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 ACTR1BP42025 376 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 CHRNA4P43681 627 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 GPR3P46089 330 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 FNTAP49354 379 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 ACTR1AP61163 376 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 GNG11P61952 73 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 CTBSQ01459 385 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 SNX1Q13596 522 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 CLPPQ16740 277 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 DEFB109BQ30KR1 87 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 C4orf17Q53FE4 359 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 LDLRAP1Q5SW96 308 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PAPD7Q5XG87 772 aaKnown RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 DENND5AQ6IQ26 1287 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 C16orf46Q6P387 395 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 RFLNAQ6ZTI6 216 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 NLRP9Q7RTR0 991 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 GALNT13Q8IUC8 556 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 NAGSQ8N159 534 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PRELID2Q8N945 189 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 HEXDCQ8WVB3 486 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 KIAA1143Q96AT1 154 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 CATSPER2Q96P56 530 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 AGAP2Q99490 1192 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 SLC38A3Q99624 504 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 DDA1Q9BW61 102 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 ASPSCR1Q9BZE9 553 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 ETNK1Q9HBU6 452 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 IL26Q9NPH9 171 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 TUBD1Q9UJT1 453 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 RIMKLBQ9ULI2 386 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 CNOT6Q9ULM6 557 aaKnown RBP9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PLAAQ9Y263 795 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 MAN2B2Q9Y2E5 1009 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 PLEKHM1Q9Y4G2 1056 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 DOPEY2Q9Y3R5 2298 aa9.85□□□□□ -0.83
CPSF4-213ENST00000484112 A0A0U1RQS6 177 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 LOC101059948A0A1B0GTJ6 334 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 AGAP14A8MT82 685 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 CHUKO15111 745 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 NUAK1O60285 661 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 DNAJC6O75061 913 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 THRAP10827 490 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 SLC2A4P14672 509 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 TPSB2P20231 275 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 CSF2RBP32927 897 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 ADCY8P40145 1251 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 LMAN1P49257 510 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 CLCNKAP51800 687 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 SARNPP82979 210 aaKnown RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 NR1D2Q14995 579 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 TPSAB1Q15661 275 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 GPR33Q49SQ1 333 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 PYCR3Q53H96 274 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 TMEM71Q6P5X7 295 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 MARK2Q7KZI7 788 aaKnown RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 NLGN4XQ8N0W4 816 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 FAM26EQ8N5C1 309 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 AVL9Q8NBF6 648 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 DDHD1Q8NEL9 900 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 NLGN4YQ8NFZ3 816 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 STYXQ8WUJ0 223 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 MAGOHBQ96A72 148 aaKnown RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 ULK4Q96C45 1275 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms