RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.56□□□□□ -1.84
CLCC1-209ENST00000482889 EXT2Q93063 718 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 ST6GALNAC6Q969X2 333 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 SPSB1Q96BD6 273 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 SPDL1Q96EA4 605 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 CDHR1Q96JP9 859 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 SEMA3CQ99985 751 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 ISCUQ9H1K1 167 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 SLA2Q9H6Q3 261 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 SEPT10Q9P0V9 454 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 KLHL9Q9P2J3 617 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 HEY2Q9UBP5 337 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 DDX25Q9UHL0 483 aaKnown RBP3.56□□□□□ -1.84
CLCC1-209ENST00000482889 KLHL20Q9Y2M5 609 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 TMEM184BQ9Y519 407 aaPredicted RBP3.56□□□□□ -1.84
CLCC1-209ENST00000482889 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
CLCC1-209ENST00000482889 ZMYM2Q9UBW7 1377 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 A0A1W2PP11 408 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 FAM90A10PA6NDY2 464 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKUB1A6NFN9 424 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 CCDC188H7C350 402 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 WNT9BO14905 357 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD28O15084 1053 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 WDR46O15213 610 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 XRCC3O43542 346 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 MOSPD3O75425 235 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SLC22A3O75751 556 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SIX3O95343 332 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 GCNT3O95395 438 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SNRNP70P08621 437 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 GJA1P17302 382 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 LBPP18428 481 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 GPTP24298 496 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 BDKRB2P30411 391 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ATP6V1E1P36543 226 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 MTHFRP42898 656 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 MATR3P43243 847 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 UBASH3AP57075 661 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 TAS2R38P59533 333 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 PTPRCAPQ14761 206 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SLC39A14Q15043 492 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 RRS1Q15050 365 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 CCDC142Q17RM4 750 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 HFEQ30201 348 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD20A4Q4UJ75 823 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SLC39A12Q504Y0 691 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 KRTCAP3Q53RY4 240 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD20A8PQ5CZ79 823 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD20A2Q5SQ80 823 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 DCST1Q5T197 706 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD20A1Q5TYW2 823 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ANKRD20A3Q5VUR7 823 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SLC18B1Q6NT16 456 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 C11orf88Q6PI97 169 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 TMEM182Q6ZP80 229 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 YTHDF3Q7Z739 585 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ZC3HC1Q86WB0 502 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 TMEM173Q86WV6 379 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 HSCBQ8IWL3 235 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 NDUFAF2Q8N183 169 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 AFAP1Q8N556 730 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ZNF548Q8NEK5 533 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 TMEM163Q8TC26 289 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ADAMTS14Q8WXS8 1223 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 OTUB1Q96FW1 271 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 PDLIM5Q96HC4 596 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ZNF582Q96NG8 517 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SPAG5Q96R06 1193 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 OR6C1Q96RD1 312 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 CSF3RQ99062 836 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 PARK7Q99497 189 aaKnown RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 DPAGT1Q9H3H5 408 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 FLRT1Q9NZU1 646 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 CNIH4Q9P003 139 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 UBA2Q9UBT2 640 aaPredicted RBP3.55□□□□□ -1.84
CLCC1-209ENST00000482889 SLC24A2Q9UI40 661 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 ACAD8Q9UKU7 415 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 KNSTRNQ9Y448 316 aa3.55□□□□□ -1.84
CLCC1-209ENST00000482889 A0A087WV48 116 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 A0A1W2PPQ1 181 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 HTR3EA5X5Y0 456 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 E5RJQ4 531 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 SOCS6O14544 535 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 NDUFS4O43181 175 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 PRAMEF11O60813 436 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 SOX30O94993 753 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 ACSL3O95573 720 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 PCGF2P35227 344 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 LIMK1P53667 647 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 C21orf58P58505 322 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 PPATQ06203 517 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 RUNX1T1Q06455 604 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 CRYZQ08257 329 aaKnown RBP3.54□□□□□ -1.84
CLCC1-209ENST00000482889 WASHC5Q12768 1159 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 RAB6CQ53S08 254 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 FAM91A1Q658Y4 838 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 KRT39Q6A163 491 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 TMEM270Q6UE05 265 aa3.54□□□□□ -1.84
CLCC1-209ENST00000482889 PARM1Q6UWI2 310 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms