RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 M0R3G1 203 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 MSI1O43347 362 aaKnown RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 NPHS1O60500 1241 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 HUS1O60921 280 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 NADKO95544 446 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 AP2A1O95782 977 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 GFAPP14136 432 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 CD68P34810 354 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 CHRNA4P43681 627 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 ATP6V0D1P61421 351 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 FPGSQ05932 587 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 RABL3Q5HYI8 236 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 AGAP7PQ5VUJ5 663 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 ANKRD34AQ69YU3 496 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 PNPT1Q8TCS8 783 aaKnown RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 ADAMTS18Q8TE60 1221 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 ZUFSPQ96AP4 578 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 EFHD2Q96C19 240 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 MLPHQ9BV36 600 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 CEP44Q9C0F1 390 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 TMEM30AQ9NV96 361 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 CMTM6Q9NX76 183 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 LAMP5Q9UJQ1 280 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 FOXD3Q9UJU5 478 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-203ENST00000480484 DSEQ9UL01 958 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 POLHQ9Y253 713 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 USP3Q9Y6I4 520 aa10.04□□□□□ -0.8
COMMD4-203ENST00000480484 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 RECQL4O94761 1208 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 HTR1BP28222 390 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 AXLP30530 894 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 RFC2P35250 354 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 POU6F1Q14863 301 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PDE12Q6L8Q7 609 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SLC26A9Q7LBE3 791 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ADCK1Q86TW2 530 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 STK32CQ86UX6 486 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PSMA8Q8TAA3 256 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 MEAF6Q9HAF1 191 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 EML4Q9HC35 981 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ANKMY1Q9P2S6 941 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 DNMT3BQ9UBC3 853 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GPR32O75388 356 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PRKD3O94806 890 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SUPT7LO94864 414 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CHEK2O96017 543 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CLTBP09497 229 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ATP5F1P24539 256 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PTPN3P26045 913 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SULT1E1P49888 294 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CDH13P55290 713 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 TAS2R39P59534 338 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GRIN2CQ14957 1233 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CCL15Q16663 113 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SETMARQ53H47 684 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 TMEM236Q5W0B7 351 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PLEKHG7Q6ZR37 379 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SAPCD2Q86UD0 394 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SPARTQ8N0X7 666 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 UTP15Q8TED0 518 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CCDC74AQ96AQ1 378 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SDCCAG3Q96C92 435 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 C3orf30Q96M34 536 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ZNF641Q96N77 438 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 LRRC4Q9HBW1 653 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 MYLKQ15746 1914 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 AP3B1O00203 1094 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 DEAF1O75398 565 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GJB3O75712 270 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ALDOCP09972 364 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 FCGR1AP12314 374 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 NFKB1P19838 968 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 TGM1P22735 817 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GRK6P43250 576 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GLUD2P49448 558 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 HTRA3P83110 453 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 PPP1R8Q12972 351 aaKnown RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 CLPPQ16740 277 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-203ENST00000480484 MEP1AQ16819 746 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 AAK1Q2M2I8 961 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ARL13BQ3SXY8 428 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 ATAD3BQ5T9A4 648 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GTF2IRD2BQ6EKJ0 949 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 AKAP14Q86UN6 197 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 GTF2IRD2Q86UP8 949 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 OR7A2PQ8NGA2 310 aa10.03□□□□□ -0.8
COMMD4-203ENST00000480484 SLC2A14Q8TDB8 520 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms