RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 USP22Q9UPT9 525 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 FAM234BA2RU67 622 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 YDJCA8MPS7 323 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 HS6ST1O60243 411 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 SLC22A3O75751 556 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 CYBBP04839 570 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 PCNAP12004 261 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ITGA2P17301 1181 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 POLR2CP19387 275 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 CYP2A7P20853 494 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ICAM3P32942 547 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 MAGEA11P43364 429 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 RPS5P46782 204 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 OR3A3P47888 321 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 SULT1E1P49888 294 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 POLR2JP52435 117 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 AP2S1P53680 142 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 AIF1P55008 147 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 HUNKP57058 714 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 RAPSNQ13702 412 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TRIP4Q15650 581 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 SMU1Q2TAY7 513 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 RBM20Q5T481 1227 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 CAPN13Q6MZZ7 669 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 ESRP1Q6NXG1 681 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 SPATC1Q76KD6 591 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ZNF438Q7Z4V0 828 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 HIPK1Q86Z02 1210 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TMEM192Q8IY95 271 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 SYTL1Q8IYJ3 562 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 NLGN4XQ8N0W4 816 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 EID3Q8N140 333 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 KBTBD8Q8NFY9 601 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 NT5C3BQ969T7 300 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 CDADC1Q9BWV3 514 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ITPAQ9BY32 194 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 C6orf62Q9GZU0 229 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 TUBB1Q9H4B7 451 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TREX1Q9NSU2 369 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 INTS7Q9NVH2 962 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 EHD3Q9NZN3 535 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TRAPPC4Q9Y296 219 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 DICER1Q9UPY3 1922 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 AIREO43918 545 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ERCC2P18074 760 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 DCTP40126 519 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 PPP3CCP48454 512 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 DIO3P55073 304 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 OTUD1Q5VV17 481 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TXNDC11Q6PKC3 985 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 SPESP1Q6UW49 350 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ISCA2Q86U28 154 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 NOXA1Q86UR1 476 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 RNF135Q8IUD6 432 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 MICU2Q8IYU8 434 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 GIPC2Q8TF65 315 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 DPF3Q92784 378 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 COQ7Q99807 217 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 SYTL2Q9HCH5 934 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 MID1IP1Q9NPA3 183 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 TAS2R9Q9NYW1 312 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 PNMA8BQ9ULN7 279 aaPredicted RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 BTBD3Q9Y2F9 522 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 AAR2Q9Y312 384 aaKnown RBP10.53□□□□□ -0.72
SIK3-210ENST00000480468 SPEF1Q9Y4P9 236 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 PCDHB14Q9Y5E9 798 aa10.53□□□□□ -0.72
SIK3-210ENST00000480468 ARNTLO00327 626 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 UGT2B17O75795 530 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 FADS2O95864 444 aaKnown RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 COL1A2P08123 1366 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 STAG3L1P0CL83 205 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 NPR1P16066 1061 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 TSPAN8P19075 237 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 EFNA1P20827 205 aaPredicted RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 BCAT1P54687 386 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 UGT2B15P54855 530 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 GPLD1P80108 840 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 SP2Q02086 613 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 ZNF33AQ06730 810 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 SEMA3BQ13214 749 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 PLA2G4EQ3MJ16 856 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 PARP15Q460N3 678 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 DLEU7Q6UYE1 221 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 ZNF517Q6ZMY9 492 aaPredicted RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 EFL1Q7Z2Z2 1120 aaKnown RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 RAB44Q7Z6P3 723 aaPredicted RBP10.52□□□□□ -0.73
SIK3-210ENST00000480468 ACOT1Q86TX2 421 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 RAB43Q86YS6 212 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 TMEM130Q8N3G9 435 aa10.52□□□□□ -0.73
SIK3-210ENST00000480468 OR8J3Q8NGG0 315 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms