RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TCN2P20062 427 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 F8A1P23610 371 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CA5AP35218 305 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 DLSTP36957 453 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CTSCP53634 463 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 MPP3Q13368 585 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 TUBB3Q13509 450 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 ITGA9Q13797 1035 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 NFE2L1Q14494 772 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 KCNAB1Q14722 419 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 PTPRCAPQ14761 206 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 PLCL1Q15111 1095 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 SLC1A5Q15758 541 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CHRNA6Q15825 494 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 TAZQ16635 292 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 SKIDA1Q1XH10 827 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 COLEC12Q5KU26 742 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 LDLRAP1Q5SW96 308 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 GPRC6AQ5T6X5 926 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 AGAP9Q5VTM2 703 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CACHD1Q5VU97 1274 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 DUS1LQ6P1R4 473 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 ABRAXAS1Q6UWZ7 409 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 C6orf15Q6UXA7 325 aaPredicted RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 WASH2PQ6VEQ5 465 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 FAM83HQ6ZRV2 1179 aaPredicted RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 BZW1Q7L1Q6 419 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 DET1Q7L5Y6 550 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 PID1Q7Z2X4 250 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 PRSS42Q7Z5A4 293 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 AMZ2Q86W34 360 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 RBM12BQ8IXT5 1001 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 KATNAL2Q8IYT4 538 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 RASGEF1AQ8N9B8 481 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 DDHD1Q8NEL9 900 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 C9orf43Q8TAL5 461 aaPredicted RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 KRT35Q92764 455 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 ZDHHC12Q96GR4 267 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 RBM41Q96IZ5 413 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 MRGPRX2Q96LB1 330 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 FCRL5Q96RD9 977 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 VAT1Q99536 393 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 APOL2Q9BQE5 337 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 EFHD1Q9BUP0 239 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 FICDQ9BVA6 458 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 HEMGNQ9BXL5 484 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 EPN3Q9H201 632 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 TRABDQ9H4I3 376 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 WASH6PQ9NQA3 447 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 ZNF71Q9NQZ8 489 aaPredicted RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 IMP3Q9NV31 184 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 HACD3Q9P035 362 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 IL17CQ9P0M4 197 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 TUBD1Q9UJT1 453 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CROTQ9UKG9 612 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 PKP3Q9Y446 797 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 ALG6Q9Y672 507 aa6.55□□□□□ -1.36
FN1-220ENST00000480024 CFAP20Q9Y6A4 193 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 USP9YO00507 2555 aaPredicted RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 PRRC2CQ9Y520 2896 aaKnown RBP6.55□□□□□ -1.36
FN1-220ENST00000480024 IGHV5-51A0A0C4DH38 117 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 CDC14CA4D256 554 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 HACD1B0YJ81 288 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 H7C0C1 242 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 STX7O15400 261 aaKnown RBP6.54□□□□□ -1.36
FN1-220ENST00000480024 ARHGAP6O43182 974 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 KATNA1O75449 491 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
FN1-220ENST00000480024 TIAF1O95411 115 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 PRAMEF1O95521 474 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 EPOP01588 193 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 MTHFD1P11586 935 aaKnown RBP6.54□□□□□ -1.36
FN1-220ENST00000480024 NR1D1P20393 614 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 MSH3P20585 1137 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 FECHP22830 423 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 PSMB4P28070 264 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 RBL1P28749 1068 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 MAGEA1P43355 309 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 ATP5OP48047 213 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 HADHBP55084 474 aaKnown RBP6.54□□□□□ -1.36
FN1-220ENST00000480024 MC1RQ01726 317 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 TBX2Q13207 712 aaPredicted RBP6.54□□□□□ -1.36
FN1-220ENST00000480024 XRCC4Q13426 336 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 OLIG2Q13516 323 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 SEPT6Q14141 434 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 MAP7Q14244 749 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 IL11RAQ14626 422 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 RPE65Q16518 533 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 SKOR2Q2VWA4 1001 aaPredicted RBP6.54□□□□□ -1.36
FN1-220ENST00000480024 FNBP1LQ5T0N5 605 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 CCDC181Q5TID7 509 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 ZDHHC20Q5W0Z9 365 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 C11orf63Q6NUN7 778 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 BBS12Q6ZW61 710 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 TMEM135Q86UB9 458 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 PPP1R3BQ86XI6 285 aa6.54□□□□□ -1.36
FN1-220ENST00000480024 RCOR2Q8IZ40 523 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms