RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SNX24Q9Y343 169 aa18.53■□□□□ 0.56
AGRN-208ENST00000479707 A0A1W2PQM1 296 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 FAM221BA6H8Z2 402 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 PRR19A6NJB7 356 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 OR52A4PA6NMU1 304 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 RAD51CO43502 376 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 BANF1O75531 89 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 SLC2A4P14672 509 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 BRAFP15056 766 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 PNLIPP16233 465 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 NSG1P42857 185 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 PPM1FP49593 454 aaPredicted RBP18.52■□□□□ 0.56
AGRN-208ENST00000479707 PRLHRP49683 370 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 ITGA8P53708 1063 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 HHEXQ03014 270 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 SPIDRQ14159 915 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 ITIH4Q14624 930 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 CLCA4Q14CN2 919 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 LYPLAL1Q5VWZ2 237 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 CDCP2Q5VXM1 449 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 SPRED1Q7Z699 444 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 SLC9B2Q86UD5 537 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 HOOK3Q86VS8 718 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 LILRA3Q8N6C8 439 aaPredicted RBP18.52■□□□□ 0.56
AGRN-208ENST00000479707 OR2L2Q8NH16 312 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 SIGLEC10Q96LC7 697 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 GFM1Q96RP9 751 aaKnown RBP18.52■□□□□ 0.56
AGRN-208ENST00000479707 SLC38A3Q99624 504 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 CPNE7Q9UBL6 633 aa18.52■□□□□ 0.56
AGRN-208ENST00000479707 BPTFQ12830 3046 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 KIR2DS5A0A0G2JLQ3 304 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 PRAMEF33A0A0G2JMD5 474 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 A0A0G2JNG1 304 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 FAM237BA0A1B0GVD1 139 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 MAGEB16A2A368 324 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 OR5K4A6NMS3 321 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 KIR2DS3K7RE56 304 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 ARNTP27540 789 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 SLC19A1P41440 591 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 MAGEA3P43357 314 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 DHX9Q08211 1270 aaKnown RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 DMPKQ09013 629 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 KIR2DS5Q14953 304 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 BBS9Q3SYG4 887 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 ANKRD20A4Q4UJ75 823 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 NKAIN2Q5VXU1 208 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 HIBCHQ6NVY1 386 aaPredicted RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 ABRAXAS1Q6UWZ7 409 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 CERS6Q6ZMG9 384 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 RBM44Q6ZP01 1051 aaKnown RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 USP53Q70EK8 1073 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 MAATS1Q7Z4T9 603 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 TRIM48Q8IWZ4 208 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 SNF8Q96H20 258 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 SGSM3Q96HU1 749 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 LINC00615Q96LM1 132 aaPredicted RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 CCM2Q9BSQ5 444 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 DPH5Q9H2P9 285 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 STN1Q9H668 368 aaKnown RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 SARS2Q9NP81 518 aaKnown RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 ZNF624Q9P2J8 865 aaPredicted RBP18.51■□□□□ 0.55
AGRN-208ENST00000479707 RPS6KL1Q9Y6S9 549 aa18.51■□□□□ 0.55
AGRN-208ENST00000479707 KNTC1P50748 2209 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 COL27A1Q8IZC6 1860 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 FAM187AA6NFU0 413 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 NTN3O00634 580 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 CSO75390 466 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 SEC31AO94979 1220 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 VIPP01282 170 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 ITGB6P18564 788 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 XRCC1P18887 633 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 PAMP19021 973 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 PPARGP37231 505 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 HALP42357 657 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 RPL21P46778 160 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 FASLGP48023 281 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 CKAP4Q07065 602 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 MORF4L2Q15014 288 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 MSS51Q4VC12 460 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 AARS2Q5JTZ9 985 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 HP1BP3Q5SSJ5 553 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 METRNLQ641Q3 311 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 WASH2PQ6VEQ5 465 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 ZNF438Q7Z4V0 828 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 DCBLD1Q8N8Z6 715 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 WDR48Q8TAF3 677 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 CXorf40BQ96DE9 158 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 STAMBPL1Q96FJ0 436 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 DEPDC7Q96QD5 511 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 WWP1Q9H0M0 922 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 WASH6PQ9NQA3 447 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 KCNK4Q9NYG8 393 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 PCDHB1Q9Y5F3 818 aa18.5■□□□□ 0.55
AGRN-208ENST00000479707 CFAP20Q9Y6A4 193 aaKnown RBP18.5■□□□□ 0.55
AGRN-208ENST00000479707 AGRPO00253 132 aa18.49■□□□□ 0.55
AGRN-208ENST00000479707 NDUFS3O75489 264 aa18.49■□□□□ 0.55
AGRN-208ENST00000479707 AP2A2O94973 939 aa18.49■□□□□ 0.55
AGRN-208ENST00000479707 OR56A5P0C7T3 313 aa18.49■□□□□ 0.55
AGRN-208ENST00000479707 MAPK9P45984 424 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms