RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CRTC3Q6UUV7 619 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 SYT10Q6XYQ8 523 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM135Q86UB9 458 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 TCF12Q99081 682 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 CCM2Q9BSQ5 444 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 POT1Q9NUX5 634 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 CPNE7Q9UBL6 633 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 RABGEF1Q9UJ41 708 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 LILRA5A6NI73 299 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 OR2AG2A6NM03 316 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 CCL22O00626 93 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 B4GAT1O43505 415 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 CPNE6O95741 557 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 EML2O95834 649 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 GOT2P00505 430 aaKnown RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 PAMP19021 973 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 MGAT1P26572 445 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TTPAP49638 278 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 PLOD1Q02809 727 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 HHEXQ03014 270 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 EIF3IQ13347 325 aaKnown RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TUBB2AQ13885 445 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 MORF4L2Q15014 288 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 DBN1Q16643 649 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 ZNF658BQ4V348 819 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 FASTKD1Q53R41 847 aaKnown RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 KIAA0930Q6ICG6 404 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TAS2R42Q7RTR8 314 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 SFTPA2Q8IWL1 248 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 KDF1Q8NAX2 398 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 SPATA4Q8NEY3 305 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 GPR150Q8NGU9 434 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 OR6P1Q8NGX9 317 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 HM13Q8TCT9 377 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 PATE1Q8WXA2 126 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM159Q96B96 161 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM74Q96NL1 305 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 GFM1Q96RP9 751 aaKnown RBP15.19■□□□□ 0.02
C9orf3-217ENST00000479161 NAT9Q9BTE0 207 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 TUBB2BQ9BVA1 445 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 PRDM8Q9NQV8 689 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 SLC2A6Q9UGQ3 507 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 ASIC3Q9UHC3 531 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 ANAPC5Q9UJX4 755 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 ASPMQ8IZT6 3477 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 IGF2RP11717 2491 aa15.19■□□□□ 0.02
C9orf3-217ENST00000479161 FAM187AA6NFU0 413 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 D6RAR5 112 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 BRAFP15056 766 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 SPINK2P20155 84 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 HALP42357 657 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 CD151P48509 253 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 CDKN1CP49918 316 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 ADARP55265 1226 aaKnown RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 CCL7P80098 99 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 ZFP36L1Q07352 338 aaKnown RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 BIRC2Q13490 618 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 KIF26BQ2KJY2 2108 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 UNQ6494/PRO21346Q6UXR6 183 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 LRRC6Q86X45 466 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 JAMLQ86YT9 394 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 C17orf53Q8N3J3 647 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 LIN37Q96GY3 246 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 SIGLEC10Q96LC7 697 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 OSGEPL1Q9H4B0 414 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 FAM96AQ9H5X1 160 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 CATSPERZQ9NTU4 200 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 SYBUQ9NX95 663 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 SAMD15Q9P1V8 674 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 ZNF624Q9P2J8 865 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-217ENST00000479161 PDP2Q9P2J9 529 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 APC2O95996 2303 aa15.18■□□□□ 0.02
C9orf3-217ENST00000479161 FRYQ5TBA9 3013 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 IGHV1OR21-1A0A087WYE8 117 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 TRABD2BA6NFA1 517 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 PFDN6O15212 129 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CD3EAPO15446 510 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CSO75390 466 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 DXOO77932 396 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 USP1O94782 785 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 FTH1P02794 183 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 RPLP0P05388 317 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 PROS1P07225 676 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 ARNTP27540 789 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 NMBRP28336 390 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CD1CP29017 333 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 SLC19A1P41440 591 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 ARCN1P48444 511 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CRADDP78560 199 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 TRA2AQ13595 282 aaKnown RBP eCLIP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 CAPRIN2Q6IMN6 1127 aaKnown RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 MRNIPQ6NTE8 343 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 WDR74Q6RFH5 385 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-217ENST00000479161 PIM3Q86V86 326 aa15.17■□□□□ 0.02
C9orf3-217ENST00000479161 KLHL7Q8IXQ5 586 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms