RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DLX3O60479 287 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SOD2P04179 222 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 KRT8P05787 483 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SLC9B1Q4ZJI4 515 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 DPP10Q8N608 796 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 TDP1Q9NUW8 608 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MYH7P12883 1935 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MYH15Q9Y2K3 1946 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 RP1L1Q8IWN7 2480 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SUV39H1O43463 412 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MTX2O75431 263 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 FGF18O76093 207 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 PCCBP05166 539 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 UMPSP11172 480 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ST13P50502 369 aaKnown RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 USP46P62068 366 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 LIPEQ05469 1076 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ABRAXAS1Q6UWZ7 409 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 PARGQ86W56 976 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SFRP1Q8N474 314 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 UBR7Q8N806 425 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 PYCR2Q96C36 320 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SLC2A13Q96QE2 648 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 OSBPL11Q9BXB4 747 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ADAM7Q9H2U9 754 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 A0A0D9SEW6 157 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 A8MT66 165 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 INPPL1O15357 1258 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 FFAR2O15552 330 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MAT2AP31153 395 aaKnown RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SLC10A2Q12908 348 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 GPM6BQ13491 265 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 PIM3Q86V86 326 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 RAD51AP1Q96B01 352 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MPP4Q96JB8 637 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 VPS35Q96QK1 796 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 TMEM248Q9NWD8 314 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ITGA2P17301 1181 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 MYL12AP19105 171 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 IMPDH1P20839 514 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ASMTP46597 345 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF252P-AS1Q0IIN9 211 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 C2orf80Q0P641 193 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CCNYL2Q5T2Q4 361 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 EIF3MQ7L2H7 374 aaKnown RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ANKRD46Q86W74 232 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 PROSER1Q86XN7 944 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 RELL1Q8IUW5 271 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 OR2T34Q8NGX1 318 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 OR2T3Q8NH03 318 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 SPATA5L1Q9BVQ7 753 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CCDC177Q9NQR7 707 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 MBLAC1A4D2B0 266 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GNAZP19086 355 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GUCA1AP43080 201 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CCNHP51946 323 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CHST15Q7LFX5 561 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 VMP1Q96GC9 406 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 MCMBPQ9BTE3 642 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 WNT6Q9Y6F9 365 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 SCAMP1O15126 338 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 PRAMEF11O60813 436 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GJB5O95377 273 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 HERVK_113P63132 956 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CHRNA6Q15825 494 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GDPD4Q6W3E5 623 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GALNT13Q8IUC8 556 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ADCY4Q8NFM4 1077 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 TSGA13Q96PP4 275 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 KIFC1Q9BW19 673 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ERVK-6Q9BXR3 956 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 POLR1BQ9H9Y6 1135 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 SLC9A8Q9Y2E8 581 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 SERPINB7O75635 380 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CLDN7O95471 211 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 EDN1P05305 212 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 C8GP07360 202 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ZNHIT3Q15649 155 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 ARSIQ5FYB1 569 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 C9orf64Q5T6V5 341 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 REP15Q6BDI9 236 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 VITQ6UXI7 678 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 FAM47BQ8NA70 645 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 OR4A15Q8NGL6 344 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 CYB5D2Q8WUJ1 264 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 OR52B2Q96RD2 323 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 FAM192AQ9GZU8 254 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GALPQ9UBC7 116 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 GNEQ9Y223 722 aaKnown RBP14.04□□□□□ -0.16
NPHP4-208ENST00000478423 POMPQ9Y244 141 aa14.04□□□□□ -0.16
NPHP4-208ENST00000478423 K7EPI3 171 aa14.03□□□□□ -0.16
NPHP4-208ENST00000478423 ASLP04424 464 aa14.03□□□□□ -0.16
NPHP4-208ENST00000478423 COPZ1P61923 177 aa14.03□□□□□ -0.16
NPHP4-208ENST00000478423 C2orf27AQ580R0 203 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms