RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TNFAIP1Q13829 316 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 EFNB3Q15768 340 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 JAKMIP3Q5VZ66 844 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 TBC1D26Q86UD7 250 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 TEX11Q8IYF3 940 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 PARP16Q8N5Y8 322 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 RND1Q92730 232 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 EIF2AK1Q9BQI3 630 aaKnown RBP4.02□□□□□ -1.77
UBR3-209ENST00000477461 NAPBQ9H115 298 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 BRF2Q9HAW0 419 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 PREBQ9HCU5 417 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 MYOZ2Q9NPC6 264 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 ZFP57Q9NU63 452 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 ZNF224Q9NZL3 707 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 CTNNA3Q9UI47 895 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 SIX4Q9UIU6 781 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 HACL1Q9UJ83 578 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 CDC14AQ9UNH5 594 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 CARD8Q9Y2G2 431 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 NAV1Q8NEY1 1877 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 SCN4AP35499 1836 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
UBR3-209ENST00000477461 BAZ2AQ9UIF9 1905 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAKO14976 1311 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 CDK5RAP2Q96SN8 1893 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 A0A0U1RQF3 1178 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GLTPD2A6NH11 291 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 SOCS6O14544 535 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 WNT9BO14905 357 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 MID1O15344 667 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 EPB41L2O43491 1005 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 FGF17O60258 216 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE7O76087 117 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 LDLRP01130 860 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 AMBPP02760 352 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 HOXB5P09067 269 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE12FP0CL80 117 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE12GP0CL81 117 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE12IP0CL82 117 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 SLC2A4P14672 509 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 ABCD3P28288 659 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 CHATP28329 748 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 PAFAH1B1P43034 410 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 LINC01547P58512 204 aaPredicted RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 FOXD4Q12950 439 aaPredicted RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE1Q13065 139 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 GAGE4Q13068 117 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 TAF11Q15544 211 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 HIST2H2ACQ16777 129 aaPredicted RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 IMMTQ16891 758 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 AMZ1Q400G9 498 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 ESCO2Q56NI9 601 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 TXNDC8Q6A555 127 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 SLC22A25Q6T423 547 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 B3GNT6Q6ZMB0 384 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 ADGRA1Q86SQ6 560 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 ZNF589Q86UQ0 364 aaPredicted RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 HEATR4Q86WZ0 1026 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 SDR42E1Q8WUS8 393 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 TMEM19Q96HH6 336 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 NR1H4Q96RI1 486 aaPredicted RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 RIOK1Q9BRS2 568 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 MMTAG2Q9BU76 263 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 TRMT61BQ9BVS5 477 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 TDRD3Q9H7E2 651 aaKnown RBP4.01□□□□□ -1.77
UBR3-209ENST00000477461 EBF2Q9HAK2 575 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 VEZTQ9HBM0 779 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 SNTG1Q9NSN8 517 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 ADAMTSL1Q8N6G6 1762 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 MYH8P13535 1937 aa4.01□□□□□ -1.77
UBR3-209ENST00000477461 FOCADQ5VW36 1801 aa4□□□□□ -1.77
UBR3-209ENST00000477461 CLRN2A0PK11 232 aa4□□□□□ -1.77
UBR3-209ENST00000477461 TCP10L2B9ZVM9 353 aa4□□□□□ -1.77
UBR3-209ENST00000477461 KLRF2D3W0D1 207 aa4□□□□□ -1.77
UBR3-209ENST00000477461 TNFSF14O43557 240 aa4□□□□□ -1.77
UBR3-209ENST00000477461 PRKAB2O43741 272 aa4□□□□□ -1.77
UBR3-209ENST00000477461 NDUFS7O75251 213 aa4□□□□□ -1.77
UBR3-209ENST00000477461 ENTPD3O75355 529 aa4□□□□□ -1.77
UBR3-209ENST00000477461 APOHP02749 345 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 GALTP07902 379 aa4□□□□□ -1.77
UBR3-209ENST00000477461 HSPD1P10809 573 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 IRF1P10914 325 aa4□□□□□ -1.77
UBR3-209ENST00000477461 EPHA8P29322 1005 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 ELF1P32519 619 aa4□□□□□ -1.77
UBR3-209ENST00000477461 STX2P32856 288 aa4□□□□□ -1.77
UBR3-209ENST00000477461 EPHX2P34913 555 aa4□□□□□ -1.77
UBR3-209ENST00000477461 GGT5P36269 586 aa4□□□□□ -1.77
UBR3-209ENST00000477461 EPS15P42566 896 aa4□□□□□ -1.77
UBR3-209ENST00000477461 SLC20A2Q08357 652 aa4□□□□□ -1.77
UBR3-209ENST00000477461 TCP10Q12799 353 aa4□□□□□ -1.77
UBR3-209ENST00000477461 TRDNQ13061 729 aa4□□□□□ -1.77
UBR3-209ENST00000477461 OASLQ15646 514 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 ALX1Q15699 326 aa4□□□□□ -1.77
UBR3-209ENST00000477461 KRT71Q3SY84 523 aa4□□□□□ -1.77
UBR3-209ENST00000477461 C14orf177Q52M58 125 aa4□□□□□ -1.77
UBR3-209ENST00000477461 IRAK1BP1Q5VVH5 260 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms