RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CAPNS2Q96L46 248 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.54
VARS2-209ENST00000477288 TNFRSF11BO00300 401 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 TPST2O60704 377 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 CLDN9O95484 217 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 LDOC1O95751 146 aaPredicted RBP18.39■□□□□ 0.54
VARS2-209ENST00000477288 MAPK12P53778 367 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 HSPB3Q12988 150 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 LAPTM5Q13571 262 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 MED27Q6P2C8 311 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 CDH7Q9ULB5 785 aa18.39■□□□□ 0.54
VARS2-209ENST00000477288 PRR5-ARHGAP8B1AHC4 643 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 TPD52L2O43399 206 aaKnown RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 KLRC4O43908 158 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 YAP1P46937 504 aaKnown RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 ARHGAP8P85298 464 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 LPCAT4Q643R3 524 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CRYBG2Q8N1P7 616 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 FAM47BQ8NA70 645 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 GSTCDQ8NEC7 633 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 IFT46Q9NQC8 304 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 GTF2IRD1Q9UHL9 959 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CDC40O60508 579 aaKnown RBP eCLIP18.39■□□□□ 0.53
VARS2-209ENST00000477288 SEMA3DO95025 777 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 SDC2P34741 201 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 EIF2S3P41091 472 aaKnown RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 CDH4P55283 916 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 PTPN20Q4JDL3 420 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 RBM18Q96H35 190 aaKnown RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 TMLHEQ9NVH6 421 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 SIRPGQ9P1W8 387 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CPQQ9Y646 472 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 ANXA4P09525 319 aaPredicted RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 KIR3DL1P43629 444 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 PLEKHG4Q58EX7 1191 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 NANOGNBQ7Z5D8 188 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 STYXQ8WUJ0 223 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 TRIM2Q9C040 744 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 FAM240BA0A1B0GVZ2 78 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 STK16O75716 305 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 RPIAP49247 311 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 DGKGP49619 791 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 ATXN7L2Q5T6C5 722 aaPredicted RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 ADGRG6Q86SQ4 1221 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CCDC36Q8IYA8 594 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CPSF7Q8N684 471 aaKnown RBP18.39■□□□□ 0.53
VARS2-209ENST00000477288 OR7D4Q8NG98 312 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 HSD17B14Q9BPX1 270 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 PFDN2Q9UHV9 154 aa18.39■□□□□ 0.53
VARS2-209ENST00000477288 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.39■□□□□ 0.539e-8■□□□□ 9
VARS2-209ENST00000477288 A0A1W2PQ67 120 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 C2orf71A6NGG8 1288 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 LCA5LO95447 670 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 RPL17P18621 184 aaKnown RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 PPP3R1P63098 170 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ECM1Q16610 540 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 HEPHQ9BQS7 1158 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 RTKNQ9BST9 563 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 SRMSQ9H3Y6 488 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 MCCC2Q9HCC0 563 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 PRPF19Q9UMS4 504 aaKnown RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 BBIP1A8MTZ0 92 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ACRP10323 421 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ASMTP46597 345 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 TLR1Q15399 786 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 EBPLQ9BY08 206 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 MED31Q9Y3C7 131 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 BTNL10A8MVZ5 291 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 BCKDKO14874 412 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 FAM155BO75949 473 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 POP4O95707 220 aaKnown RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 CD247P20963 164 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 TM4SF1P30408 202 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 HSPA7P48741 367 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 PGDP52209 483 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ARF3P61204 181 aaPredicted RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 ARF1P84077 181 aaKnown RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 BMT2Q1RMZ1 405 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 TBC1D21Q8IYX1 336 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ZNF615Q8N8J6 731 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 HOPXQ9BPY8 73 aaPredicted RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 EME2A4GXA9 379 aaPredicted RBP18.38■□□□□ 0.53
VARS2-209ENST00000477288 GAD2Q05329 585 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 DCBLD1Q8N8Z6 715 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 GIPC3Q8TF64 312 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 HMCESQ96FZ2 354 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 DIRAS2Q96HU8 199 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 PDZD7Q9H5P4 517 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 IPPKQ9H8X2 491 aa18.38■□□□□ 0.53
VARS2-209ENST00000477288 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 B4GALT4O60513 344 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 THRBP10828 461 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 GNA12Q03113 381 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 SLC13A2Q13183 592 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 AMZ1Q400G9 498 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 DCST1Q5T197 706 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms