RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CCDC83Q8IWF9 413 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SPACA3Q8IXA5 215 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PHC2Q8IXK0 858 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GHDCQ8N2G8 530 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DTX3Q8N9I9 347 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ADPRHL1Q8NDY3 354 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 BHLHE23Q8NDY6 225 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SRFBP1Q8NEF9 429 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DNAAF1Q8NEP3 725 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 OR52E1Q8NGJ3 308 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 OR10T2Q8NGX3 314 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 OCC1Q8TAD7 63 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC22A8Q8TCC7 542 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GPT2Q8TD30 523 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ELP5Q8TE02 316 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ASB11Q8WXH4 323 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ALG3Q92685 438 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RABGGTAQ92696 567 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DPF1Q92782 380 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KAT2AQ92830 837 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 EDAQ92838 391 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FBXO32Q969P5 355 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 UTP4Q969X6 686 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC39Q96DD0 335 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RNF31Q96EP0 1072 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZBTB45Q96K62 511 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CAPNS2Q96L46 248 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KLHL32Q96NJ5 620 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KLHL5Q96PQ7 755 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 NUDCD1Q96RS6 583 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TRIB1Q96RU8 372 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PCDHB18PQ96TA0 734 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DPYSL5Q9BPU6 564 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DDX50Q9BQ39 737 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 BCL7BQ9BQE9 202 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SIKE1Q9BRV8 207 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 WDR83Q9BRX9 315 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZSCAN5AQ9BUG6 496 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 VN1R3Q9BXE9 311 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TBC1D10AQ9BXI6 508 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MOV10L1Q9BXT6 1211 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KATNBL1Q9H079 304 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 NUAK2Q9H093 628 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SPATC1LQ9H0A9 340 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 VCX2Q9H322 139 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GOLPH3LQ9H4A5 285 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 EXO5Q9H790 373 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MINDY3Q9H8M7 445 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SRD5A3Q9H8P0 318 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CNOT10Q9H9A5 744 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RPF1Q9H9Y2 349 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KIF9Q9HAQ2 790 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PCDH18Q9HCL0 1135 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ENTPD7Q9NQZ7 604 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC22A11Q9NSA0 550 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC6A13Q9NSD5 602 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KLC4Q9NSK0 619 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FAM212BQ9NTI7 297 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 AGPAT5Q9NUQ2 364 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TBC1D13Q9NVG8 400 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SMPD3Q9NY59 655 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MTMR4Q9NYA4 1195 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TBC1D7Q9P0N9 293 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ABI3Q9P2A4 366 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KLHL8Q9P2G9 620 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 UBQLN2Q9UHD9 624 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC24A2Q9UI40 661 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC25A13Q9UJS0 675 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FBXW11Q9UKB1 542 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 VAV3Q9UKW4 847 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 NDRG4Q9ULP0 352 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 EXOC6BQ9Y2D4 811 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CARD8Q9Y2G2 431 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 AAR2Q9Y312 384 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RAI2Q9Y5P3 530 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GMEB1Q9Y692 573 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC4A4Q9Y6R1 1079 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 COMMD3-BMI1R4GMX3 469 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PKD1L3Q7Z443 1732 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLIT3O75094 1523 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RNF123Q5XPI4 1314 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PNPLA7Q6ZV29 1317 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SH3TC1Q8TE82 1336 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MUC2Q02817 5179 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SSH2Q76I76 1423 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CTTNBP2Q8WZ74 1663 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ADGRL2O95490 1459 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PXDNQ92626 1479 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 A0A075B6Q4 140 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FAM237AA0A1B0GTK4 181 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZC3H12DA2A288 527 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FAM149AA5PLN7 773 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SLC15A5A6NIM6 579 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ACOD1A6NK06 481 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FOXO6A8MYZ6 492 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF879B4DU55 563 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 B5MCH6 92 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ADM5C9JUS6 153 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 E9PLN8 166 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FFAR3O14843 346 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms