RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ZNF33AQ06730 810 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TRAP1Q12931 704 aaKnown RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 TRIM32Q13049 653 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TUBA3CQ13748 450 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 DGCR6Q14129 220 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 GRB14Q14449 540 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 PRAMEF19Q5SWL8 479 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 FAM171BQ6P995 826 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 DGLUCYQ7Z3D6 616 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 PGBD5Q8N414 524 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 RAB2BQ8WUD1 216 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 BTBD2Q9BX70 525 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 HMG20AQ9NP66 347 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 PAK1IP1Q9NWT1 392 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 SMPD3Q9NY59 655 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 DNAJC15Q9Y5T4 150 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SNX5Q9Y5X3 404 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 VWA8A3KMH1 1905 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 H3BMM5 538 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 HUS1O60921 280 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CPB1P15086 417 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 STMN1P16949 149 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CD40LGP29965 261 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SERPINB1P30740 379 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 RPS9P46781 194 aaKnown RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 GRB7Q14451 532 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ZNF678Q5SXM1 525 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 RSBN1Q5VWQ0 802 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 ZNF470Q6ECI4 717 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 KIAA0930Q6ICG6 404 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 HACD2Q6Y1H2 254 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 KIAA0408Q6ZU52 694 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ABI1Q8IZP0 508 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 L3HYPDHQ96EM0 354 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SENP8Q96LD8 212 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 BBS2Q9BXC9 721 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 GPN2Q9H9Y4 310 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 ARNT2Q9HBZ2 717 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CCM2LQ9NUG4 571 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 CMTM6Q9NX76 183 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ENPP5Q9UJA9 477 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ZNF225Q9UK10 706 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 VWA7Q9Y334 891 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 OR51F1A6NGY5 319 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 H0YC42 278 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 MATN3O15232 486 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 IPO13O94829 963 aaKnown RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 UBL4AP11441 157 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 DDX5P17844 614 aaKnown RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 ATP5F1P24539 256 aaPredicted RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 PIGAP37287 484 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CASP3P42574 277 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 GALNT1Q10472 559 aaPredicted RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 CSHL1Q14406 222 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CYP51A1Q16850 503 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 VPS26BQ4G0F5 336 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 RABL3Q5HYI8 236 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 PIWIL4Q7Z3Z4 852 aaKnown RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 SCD5Q86SK9 330 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 ADGRG5Q8IZF4 528 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 IPMKQ8NFU5 416 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 OR10T2Q8NGX3 314 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 ATL1Q8WXF7 558 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 TRIB2Q92519 343 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 ING2Q9H160 280 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 WDCPQ9H6R7 721 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 SEPT3Q9UH03 358 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 FBXO5Q9UKT4 447 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 KCTD3Q9Y597 815 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 XPNPEP2O43895 674 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 RASAL1O95294 804 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CRYZL1O95825 349 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 S1PR4O95977 384 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 UGT2B4P06133 528 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 MAP2K4P45985 399 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 SQLEQ14534 574 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CRY1Q16526 586 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 SMU1Q2TAY7 513 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CTU2Q2VPK5 515 aaKnown RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 CCNYL2Q5T2Q4 361 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 LDLRAD1Q5T700 205 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 KDELC2Q7Z4H8 507 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 NLGN4XQ8N0W4 816 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CADM2Q8N3J6 435 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 POC5Q8NA72 575 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 MYEOVQ96EZ4 313 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 ELMO2Q96JJ3 720 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 NSUN5Q96P11 429 aaKnown RBP8.29□□□□□ -1.08
VAPB-205ENST00000476395 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 MAGEE1Q9HCI5 957 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 CHST12Q9NRB3 414 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms