RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ATP6V1B1P15313 513 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 IL1RNP18510 177 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 YWHAQP27348 245 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 PCSK1P29120 753 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 MAGEA8P43361 318 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SLC11A1P49279 550 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SERPINH1P50454 418 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 HNRNPFP52597 415 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 TTC3P53804 2025 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 CDKN2DP55273 166 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 YBX1P67809 324 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 EMX2Q04743 252 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TUBA3CQ13748 450 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 KCNC3Q14003 757 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 KIAA0040Q15053 153 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZNF829Q3KNS6 432 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 PDCD4Q53EL6 469 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 CYBRD1Q53TN4 286 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TMTC4Q5T4D3 741 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ACBD5Q5T8D3 534 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZNF470Q6ECI4 717 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SYCE2Q6PIF2 218 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 AGMOQ6ZNB7 445 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TBC1D21Q8IYX1 336 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 RGL4Q8IZJ4 473 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 MYO1HQ8N1T3 1032 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 GALNT4Q8N4A0 578 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 OR13F1Q8NGS4 319 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 GABPB2Q8TAK5 448 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 SH3RF2Q8TEC5 729 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZDHHC1Q8WTX9 485 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 EDAQ92838 391 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 KIAA1191Q96A73 305 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TBC1D20Q96BZ9 403 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 C12orf43Q96C57 262 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 ISOC1Q96CN7 298 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 LRRC58Q96CX6 371 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TMA16Q96EY4 203 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 ELMO2Q96JJ3 720 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SCYL1Q96KG9 808 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 MARK4Q96L34 752 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZNF599Q96NL3 588 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 CITED4Q96RK1 184 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TRIB3Q96RU7 358 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 TMEM79Q9BSE2 394 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 HERC2P3Q9BVR0 1158 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 APOL5Q9BWW9 433 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 RPF2Q9H7B2 306 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 NOL11Q9H8H0 719 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 GPN2Q9H9Y4 310 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 NTN4Q9HB63 628 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 FBRSL1Q9HCM7 1045 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 ACSS2Q9NR19 701 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 MRPL17Q9NRX2 175 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 AIG1Q9NVV5 245 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 RBM22Q9NW64 420 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBR4-212ENST00000475973 TMEM248Q9NWD8 314 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZIM2Q9NZV7 527 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 NYNRINQ9P2P1 1898 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 ZNF225Q9UK10 706 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 PRG3Q9Y2Y8 225 aaPredicted RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 PCDHGB1Q9Y5G3 927 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 IRAK3Q9Y616 596 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 PLXNA3P51805 1871 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 A0A0J9YYE9 177 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 TMEM221A6NGB7 291 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ARL5CA6NH57 179 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 MEIS3P2A8K0S8 358 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 H3BMQ9 156 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 M0R296 226 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 MEN1O00255 615 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 AZIN1O14977 448 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ARPC2O15144 300 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 PAGE1O75459 146 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 TIPRLO75663 272 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ATE1O95260 518 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 HPRP00739 348 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 IGLV3-27P01718 113 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 SOD2P04179 222 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ENO2P09104 434 aaPredicted RBP6.79□□□□□ -1.32
UBR4-212ENST00000475973 ARSAP15289 507 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ZNF12P17014 697 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 ZNF37AP17032 561 aaPredicted RBP6.79□□□□□ -1.32
UBR4-212ENST00000475973 RHOQP17081 205 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 TYMPP19971 482 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 FASP25445 335 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 CCR1P32246 355 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 AVPR1AP37288 418 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 CAPGP40121 348 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 CHRNA4P43681 627 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 EIF1AXP47813 144 aaKnown RBP6.79□□□□□ -1.32
UBR4-212ENST00000475973 OR1G1P47890 313 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 CD97P48960 835 aa6.79□□□□□ -1.32
UBR4-212ENST00000475973 SCNN1GP51170 649 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms