RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CMPK1P30085 196 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NR1H2P55055 460 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 RGS8P57771 180 aaPredicted RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 LILRA4P59901 499 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SLC5A9Q2M3M2 681 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 STX12Q86Y82 276 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CHST4Q8NCG5 386 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 DQX1Q8TE96 717 aaKnown RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 WDR60Q8WVS4 1066 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TMEM27Q9HBJ8 222 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CKLFQ9UBR5 152 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 MAGEL2Q9UJ55 1249 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 DHRS7Q9Y394 339 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TMEM131LA2VDJ0 1609 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 GNB5O14775 395 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 FGF19O95750 216 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 AP2A1O95782 977 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SERPINA1P01009 418 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TCF4P15884 667 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PAX3P23760 479 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TTKP33981 857 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 RTP1P59025 263 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TRAP1Q12931 704 aaKnown RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 BMT2Q1RMZ1 405 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 GFOD2Q3B7J2 385 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 GCNT6Q5T4J0 391 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SULT1C3Q6IMI6 304 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SNX20Q7Z614 316 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SLCO6A1Q86UG4 719 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 KBTBD7Q8WVZ9 684 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 MIOSQ9NXC5 875 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NADKO95544 446 aaPredicted RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 PPIBP23284 216 aaKnown RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 SLC13A2Q13183 592 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CBX3Q13185 183 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 FAM182AQ5T1J6 154 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 MED27Q6P2C8 311 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 ELOVL7A1L3X0 281 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TNFRSF11BO00300 401 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PER2O15055 1255 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 GSC2O15499 205 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 IFNA6P05013 189 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 LYNP07948 512 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NCK1P16333 377 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PBX3P40426 434 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PLA2G16P53816 162 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NRLP54845 237 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SMARCB1Q12824 385 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CBFBQ13951 182 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 ANKRD22Q5VYY1 191 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TCAIMQ8N3R3 496 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CLEC4CQ8WTT0 213 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 ABCB8Q9NUT2 735 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PCDHGB3Q9Y5G1 929 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FAM149AA5PLN7 773 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 hCG_2039718K7EN88 272 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SEPT4O43236 478 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 EDF1O60869 148 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 RSL1D1O76021 490 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 RGS20O76081 388 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CLCQ05315 142 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 AMZ1Q400G9 498 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 HDDC3Q8N4P3 179 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 LCN9Q8WX39 176 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FAM83DQ9H4H8 585 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 REXO2Q9Y3B8 237 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 CPQQ9Y646 472 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 BCKDKO14874 412 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 UBXN11Q5T124 520 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CPNE9Q8IYJ1 553 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 LNX2Q8N448 690 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SCAMP5Q8TAC9 235 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 SETD6Q8TBK2 473 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ZNF483Q8TF39 744 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 COL20A1Q9P218 1284 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 PCDHGA3Q9Y5H0 932 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FAM237AA0A1B0GTK4 181 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CAPN8A6NHC0 703 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 MTRF1O75570 445 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 RHOQP17081 205 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 KCNA5P22460 613 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 PUDPQ08623 228 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 ELP6Q0PNE2 266 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 REP15Q6BDI9 236 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 GHDCQ8N2G8 530 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 OR2L5Q8NG80 312 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 RBM18Q96H35 190 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 EIF2B4Q9UI10 523 aaKnown RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 PCDHA2Q9Y5H9 948 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 FADS3Q9Y5Q0 445 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CLDN4O14493 209 aa10.85□□□□□ -0.67
VAPB-204ENST00000475243 CHRM5P08912 532 aaPredicted RBP10.85□□□□□ -0.67
VAPB-204ENST00000475243 SMPD1P17405 629 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms