RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DENND1AQ8TEH3 1009 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 OIT3Q8WWZ8 545 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SLC25A28Q96A46 364 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 MTERF3Q96E29 417 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF558Q96NG5 402 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 GPATCH1Q9BRR8 931 aaKnown RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 RBM38Q9H0Z9 239 aaKnown RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 DDX43Q9NXZ2 648 aaKnown RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 RCC2Q9P258 522 aaKnown RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SNX7Q9UNH6 387 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 KLHL20Q9Y2M5 609 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SNX5Q9Y5X3 404 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 A0A087WV48 116 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 A0A0B4J293 547 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 A0A0U1RQG5 324 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 TRIM64A6NGJ6 449 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 OR6C75A6NL08 312 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 FAM90A26D6RGX4 464 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 J3QR06 171 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 CLDN4O14493 209 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 IFIT3O14879 490 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SLC7A4O43246 635 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 PLPP2O43688 288 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF217O75362 1048 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 MED24O75448 989 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SLCO2B1O94956 709 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 CELF2O95319 508 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 VIMP08670 466 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 KCNA5P22460 613 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 HRH2P25021 359 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 TLX1P31314 330 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 APOBEC1P41238 236 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 RFX2P48378 723 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 AMTP48728 403 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SLC9A3P48764 834 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 LIMK1P53667 647 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 MRPS21P82921 87 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SRSF4Q08170 494 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 DDR1Q08345 913 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 PPIGQ13427 754 aaKnown RBP eCLIP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 E2F5Q15329 346 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 EFNB3Q15768 340 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 RGMBQ6NW40 437 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 BRAT1Q6PJG6 821 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 CCNI2Q6ZMN8 369 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 ZBTB49Q6ZSB9 765 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 IRF2BP2Q7Z5L9 587 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 CTU1Q7Z7A3 348 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 DZIP1Q86YF9 867 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 C4orf19Q8IY42 314 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SIX6OS1Q8N1H7 587 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 C10orf53Q8N6V4 93 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 BBS10Q8TAM1 723 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 TAS1R2Q8TE23 839 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 GRK7Q8WTQ7 553 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 KCNE4Q8WWG9 221 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 LINC00615Q96LM1 132 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SFXN2Q96NB2 322 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 CAMK1GQ96NX5 476 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 LRRC3BQ96PB8 259 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 OR1F2PQ96R84 312 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SYT17Q9BSW7 474 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 MLPHQ9BV36 600 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 SF3B5Q9BWJ5 86 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 PPIL3Q9H2H8 161 aaKnown RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 KCNN2Q9H2S1 579 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 PCDH9Q9HC56 1237 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 HHATLQ9HCP6 504 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF804BA4D1E1 1349 aa4.16□□□□□ -1.74
BRCA1-212ENST00000473961 A0A0U1RQK1 487 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 BICDL2A1A5D9 508 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF320A2RRD8 509 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CGB1A6NKQ9 187 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SMTNL1A8MU46 457 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD66B4E2M5 251 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 TMEM189-UBE2V1I3L0A0 370 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 I6L893 689 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 DVL1O14640 695 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 NDUFS7O75251 213 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CREG1O75629 220 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PDGFRAP16234 1089 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CDC25CP30307 473 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SOAT1P35610 550 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 COMPP49747 757 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 MXI1P50539 228 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PEX5P50542 639 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ASCL1P50553 236 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PDE1BQ01064 536 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 UBXN1Q04323 297 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 YWHAHQ04917 246 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PPATQ06203 517 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PLA2G7Q13093 441 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 UBE2V1Q13404 147 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SLMAPQ14BN4 828 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 MTX3Q5HYI7 312 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 C6orf136Q5SQH8 315 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SPOUT1Q5T280 376 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms