RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 DNPEPQ9ULA0 475 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 MYO6Q9UM54 1294 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 FARSAQ9Y285 508 aaKnown RBP9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 MAP4K5Q9Y4K4 846 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 SPENQ96T58 3664 aaKnown RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 UBA6A0AVT1 1052 aaPredicted RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 LRRD1A4D1F6 860 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 OR6C74A6NCV1 312 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 SCRG1O75711 98 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 PROSCO94903 275 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 CES1P23141 567 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 KDELR1P24390 212 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 HALP42357 657 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 RPL26P61254 145 aaKnown RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 RPS15P62841 145 aaKnown RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 CDK18Q07002 472 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 GTF2H3Q13889 308 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 INPP5JQ15735 1006 aaPredicted RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 PTCHD3Q3KNS1 767 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 TMEM220Q6QAJ8 160 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 LILRA3Q8N6C8 439 aaPredicted RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 ENDOVQ8N8Q3 282 aaKnown RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 FDCSPQ8NFU4 85 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 FAM71BQ8TC56 605 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 HDAC11Q96DB2 347 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 RNF157Q96PX1 679 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 INSM2Q96T92 566 aaPredicted RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 TIMM29Q9BSF4 260 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 ZSCAN5AQ9BUG6 496 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 NUDT9Q9BW91 350 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 TLR10Q9BXR5 811 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 EPB41L1Q9H4G0 881 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 C10orf88Q9H8K7 445 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 HRASLS2Q9NWW9 162 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 SOHLH2Q9NX45 425 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 TMEM63CQ9P1W3 806 aa9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 RPL26L1Q9UNX3 145 aaKnown RBP9.88□□□□□ -0.83
SCAMP3-205ENST00000472397 MED13Q9UHV7 2174 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 CLDN1O95832 211 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 KRT1P04264 644 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 PVRP15151 417 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 POLR2CP19387 275 aaPredicted RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 MX2P20592 715 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 FECHP22830 423 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 OTX2P32243 289 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ITGA1P56199 1179 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ABRQ12979 859 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 XRCC4Q13426 336 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 NR1I3Q14994 352 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 NR6A1Q15406 480 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 PPP2R5EQ16537 467 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 UGT8Q16880 541 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 CRTC2Q53ET0 693 aaPredicted RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 FNBP1LQ5T0N5 605 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ALKBH5Q6P6C2 394 aaKnown RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 DAAM2Q86T65 1068 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 LRRC49Q8IUZ0 686 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 SRRM1Q8IYB3 904 aaKnown RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 CISD2Q8N5K1 135 aaKnown RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 PLD5Q8N7P1 536 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 Q8NA96 180 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 GALNT11Q8NCW6 608 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 BLOC1S5Q8TDH9 187 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 CLIP3Q96DZ5 547 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 IMP4Q96G21 291 aaKnown RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ZNF514Q96K75 400 aaPredicted RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 C12orf66Q96MD2 445 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ZNF830Q96NB3 372 aaPredicted RBP9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 TTC25Q96NG3 672 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 ZNF670Q9BS34 389 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 DEF6Q9H4E7 631 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 FAM96AQ9H5X1 160 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 UCK1Q9HA47 277 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 GLOD4Q9HC38 313 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 CBX8Q9HC52 389 aa9.87□□□□□ -0.83
SCAMP3-205ENST00000472397 SPTBN1Q01082 2364 aaKnown RBP9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 RGSL1A5PLK6 1076 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 SLC9B1P1A6NJY1 282 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 APOL1O14791 398 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 VEGFDO43915 354 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 MT-ND3P03897 115 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 SERPING1P05155 500 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 NFKB1P19838 968 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 LMAN1P49257 510 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 KPNA2P52292 529 aaKnown RBP9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 IFI35P80217 286 aaPredicted RBP9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 TMPRSS15P98073 1019 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 FANCCQ00597 558 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 PDE1BQ01064 536 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 CACNA1DQ01668 2161 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 PPIDQ08752 370 aaKnown RBP9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 SLC9A5Q14940 896 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 PDK2Q15119 407 aa9.86□□□□□ -0.83
SCAMP3-205ENST00000472397 SIRPB2Q5JXA9 342 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms