RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 FAM96AQ9H5X1 160 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 CCDC86Q9H6F5 360 aaKnown RBP16.48■□□□□ 0.23
TSPO-205ENST00000472378 UCK1Q9HA47 277 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 PRDM8Q9NQV8 689 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 CHRAC1Q9NRG0 131 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 POT1Q9NUX5 634 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 CPNE7Q9UBL6 633 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 DKK4Q9UBT3 224 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 SLC23A2Q9UGH3 650 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 SOX13Q9UN79 622 aa16.48■□□□□ 0.23
TSPO-205ENST00000472378 PCYT1BQ9Y5K3 369 aaPredicted RBP16.48■□□□□ 0.23
TSPO-205ENST00000472378 CCDC78A2IDD5 438 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 PRR19A6NJB7 356 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 PPM1DO15297 605 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 DUX1O43812 170 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 PROS1P07225 676 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 OR56A5P0C7T3 313 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 MGAT1P26572 445 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 MLLT3P42568 568 aaPredicted RBP16.47■□□□□ 0.23
TSPO-205ENST00000472378 ARSDP51689 593 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 CTSCP53634 463 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.47■□□□□ 0.23
TSPO-205ENST00000472378 MRNIPQ6NTE8 343 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 SDCCAG8Q86SQ7 713 aaPredicted RBP16.47■□□□□ 0.23
TSPO-205ENST00000472378 KLHL7Q8IXQ5 586 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
TSPO-205ENST00000472378 HM13Q8TCT9 377 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 ZFPM2Q8WW38 1151 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 PATE1Q8WXA2 126 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 ZMYND15Q9H091 742 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 CATSPERZQ9NTU4 200 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 VPS9D1Q9Y2B5 631 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 HEBP2Q9Y5Z4 205 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 AK5Q9Y6K8 562 aa16.47■□□□□ 0.23
TSPO-205ENST00000472378 PIKFYVEQ9Y2I7 2098 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 TRBV23OR9-2A0A075B6M9 112 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 LILRA5A6NI73 299 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 GOT2P00505 430 aaKnown RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 SLC35G4P0C7Q5 338 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 NDUFS1P28331 727 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 PBLDP30039 288 aaPredicted RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 CCKBRP32239 447 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 FOXN2P32314 431 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 INHBCP55103 352 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 B4GALNT1Q00973 533 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 RPA4Q13156 261 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 CAMK2BQ13554 666 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 RTP5Q14D33 572 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 DBN1Q16643 649 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 AMZ1Q400G9 498 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 RNF187Q5TA31 235 aaPredicted RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 MAATS1Q7Z4T9 603 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 PIANPQ8IYJ0 282 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 BBOF1Q8ND07 529 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 WDR36Q8NI36 951 aaKnown RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 LIN37Q96GY3 246 aaPredicted RBP16.46■□□□□ 0.23
TSPO-205ENST00000472378 NAT9Q9BTE0 207 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 TREX1Q9NSU2 369 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 RABGEF1Q9UJ41 708 aa16.46■□□□□ 0.23
TSPO-205ENST00000472378 CCDC187A0A096LP49 1063 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 FAM237BA0A1B0GVD1 139 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 A0A1W2PQM1 296 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 CD3EAPO15446 510 aaKnown RBP16.45■□□□□ 0.22
TSPO-205ENST00000472378 RPL10P27635 214 aaKnown RBP16.45■□□□□ 0.22
TSPO-205ENST00000472378 LSSP48449 732 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 TERF1P54274 439 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 OR1D5P58170 312 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 TRA2AQ13595 282 aaKnown RBP eCLIP16.45■□□□□ 0.22
TSPO-205ENST00000472378 SEPT7Q16181 437 aaKnown RBP16.45■□□□□ 0.22
TSPO-205ENST00000472378 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
TSPO-205ENST00000472378 KLHL35Q6PF15 583 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 ZNF534Q76KX8 674 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 LRRC6Q86X45 466 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 SFTPA2Q8IWL1 248 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 NAT8LQ8N9F0 302 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 KDF1Q8NAX2 398 aaPredicted RBP16.45■□□□□ 0.22
TSPO-205ENST00000472378 OR4D9Q8NGE8 314 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 ZNF778Q96MU6 729 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 CNTNAP3BQ96NU0 1288 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 SERPINB12Q96P63 405 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 TCF12Q99081 682 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 CNTNAP3Q9BZ76 1288 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 POLR1BQ9H9Y6 1135 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 SLC2A6Q9UGQ3 507 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 COLEC10Q9Y6Z7 277 aa16.45■□□□□ 0.22
TSPO-205ENST00000472378 ACACAQ13085 2346 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 IGHV1OR21-1A0A087WYE8 117 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 TCRBV7S3A2A0A539 114 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 C1QTNF9BB2RNN3 333 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 IFRD1O00458 451 aaPredicted RBP16.44■□□□□ 0.22
TSPO-205ENST00000472378 DNALI1O14645 258 aaPredicted RBP16.44■□□□□ 0.22
TSPO-205ENST00000472378 LIN7AO14910 233 aaPredicted RBP16.44■□□□□ 0.22
TSPO-205ENST00000472378 B4GAT1O43505 415 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 NDUFS3O75489 264 aa16.44■□□□□ 0.22
TSPO-205ENST00000472378 EML2O95834 649 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms