RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ELMO1Q92556 727 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 KCNJ9Q92806 393 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 MTBPQ96DY7 904 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 PDXPQ96GD0 296 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 SCARF2Q96GP6 870 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 ELF4Q99607 663 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 TIMM29Q9BSF4 260 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 AARSD1Q9BTE6 412 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 GTPBP2Q9BX10 602 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 EPB41L4BQ9H329 900 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 SARS2Q9NP81 518 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 PSMC3IPQ9P2W1 217 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 PSAT1Q9Y617 370 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 FAM95CA0A1B0GW59 222 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 NEMP2A6NFY4 417 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 MGAT4DA6NG13 374 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 GOLGA6L10A6NI86 522 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 SMIM23A6NLE4 172 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 RASGRF2O14827 1237 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 CDH16O75309 829 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 ITGA2BP08514 1039 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 ACP5P13686 325 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 H2AFXP16104 143 aaPredicted RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 CTSCP53634 463 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 LIMK2P53671 638 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 GRIK2Q13002 908 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 EIF2B5Q13144 721 aaKnown RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 PDAP1Q13442 181 aaKnown RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 USP10Q14694 798 aaKnown RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 ZNF542PQ5EBM4 170 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 TPRG1LQ5T0D9 272 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 UBAP2Q5T6F2 1119 aaKnown RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 HECTD2Q5U5R9 776 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 GKN2Q86XP6 184 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 CFAP206Q8IYR0 622 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 RIBC1Q8N443 379 aaPredicted RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 BEND7Q8N7W2 519 aaPredicted RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 OR2L2Q8NH16 312 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 ASZ1Q8WWH4 475 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 TMEM159Q96B96 161 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 LINC00615Q96LM1 132 aaPredicted RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 BIRC8Q96P09 236 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 NDNQ99608 321 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 OSGEPL1Q9H4B0 414 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 CAPN10Q9HC96 672 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 TRMT6Q9UJA5 497 aaKnown RBP16.59■□□□□ 0.25
CCM2-205ENST00000472223 SLC39A10Q9ULF5 831 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 PRKAB1Q9Y478 270 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 PRSS21Q9Y6M0 314 aa16.59■□□□□ 0.25
CCM2-205ENST00000472223 PIKFYVEQ9Y2I7 2098 aa16.58■□□□□ 0.25
CCM2-205ENST00000472223 LIN7AO14910 233 aaPredicted RBP16.58■□□□□ 0.24
CCM2-205ENST00000472223 LRP3O75074 770 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 TCEA3O75764 348 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 C1QAP02745 245 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 SHBGP04278 402 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 SNRPAP09012 282 aaKnown RBP16.58■□□□□ 0.24
CCM2-205ENST00000472223 STMN1P16949 149 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 ITGB6P18564 788 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 IDSP22304 550 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 GABRB3P28472 473 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 ARHGAP8P85298 464 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 BOP1Q14137 746 aaKnown RBP16.58■□□□□ 0.24
CCM2-205ENST00000472223 CASP8Q14790 479 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 CCDC6Q16204 474 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 HLA-BQ31612 363 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 PRRT3Q5FWE3 981 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 MROH9Q5TGP6 573 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 FBXO38Q6PIJ6 1188 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 ADGRD1Q6QNK2 874 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 RAPH1Q70E73 1250 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 TAF8Q7Z7C8 310 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 LMX1AQ8TE12 382 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 GAREM1Q9H706 876 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 SYTL2Q9HCH5 934 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 KLC4Q9NSK0 619 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 FAM8A1Q9UBU6 413 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 TLK1Q9UKI8 766 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 ACSL5Q9ULC5 683 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 DNAJC16Q9Y2G8 782 aa16.58■□□□□ 0.24
CCM2-205ENST00000472223 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
CCM2-205ENST00000472223 PATE3B3GLJ2 98 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 NIPSNAP2O75323 286 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 FAM155BO75949 473 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 ANXA6P08133 673 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 F7P08709 466 aaPredicted RBP16.57■□□□□ 0.24
CCM2-205ENST00000472223 ZNF806P0C7X5 589 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 SLC2A4P14672 509 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 ENGP17813 658 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 KRT15P19012 456 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 ABCG1P45844 678 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 SLCO1A2P46721 670 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 RXRGP48443 463 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 RGS4P49798 205 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 CCT8P50990 548 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 IRX4P78413 519 aa16.57■□□□□ 0.24
CCM2-205ENST00000472223 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms