RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 DLGAP4Q9Y2H0 992 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 DOCK7Q96N67 2140 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CTAGE9A4FU28 777 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 OR5K3A6NET4 321 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 HNRNPCL2B2RXH8 293 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 H0YIN7 160 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 ZNHIT1O43257 154 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PRAMEF11O60813 436 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 DKC1O60832 514 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 WISP2O76076 250 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PAPSS2O95340 614 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 AFPP02771 609 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CTAGE8P0CG41 777 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PLA2G2AP14555 144 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 POLR2CP19387 275 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 GNL1P36915 607 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 COG7P83436 770 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 ZBTB17Q13105 803 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PRPF4BQ13523 1007 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 SNTB1Q13884 538 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 MELKQ14680 651 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CBWD6Q4V339 395 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TCP11X2Q5H9J9 407 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CBWD3Q5JTY5 395 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 C9orf57Q5W0N0 161 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 SFR1Q86XK3 245 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CTAGE4Q8IX94 777 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 ODF3L1Q8IXM7 274 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 C1orf52Q8N6N3 182 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 ZNF441Q8N8Z8 693 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TDRD5Q8NAT2 981 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 CCDC191Q8NCU4 936 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PAPD5Q8NDF8 572 aaKnown RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TSPAN14Q8NG11 270 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 PPP4R1Q8TF05 950 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 SLC38A5Q8WUX1 472 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TMEM255BQ8WV15 326 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 ERLEC1Q96DZ1 483 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TTC14Q96N46 770 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 LRMDAQ9H2I8 198 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 C6orf106Q9H6K1 298 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 KLHL9Q9P2J3 617 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 NFKBIL1Q9UBC1 381 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-209ENST00000472044 IL17BQ9UHF5 180 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 KCNS2Q9ULS6 477 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 OR2W1Q9Y3N9 320 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 YIPF1Q9Y548 306 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 TRPV2Q9Y5S1 764 aa3.7□□□□□ -1.82
PTCD3-209ENST00000472044 SAA2-SAA4A0A096LPE2 208 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PLK4O00444 970 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 CLGNO14967 610 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 TO15178 435 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 SLC16A5O15375 505 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 WDR1O75083 606 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 LDLRP01130 860 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ITGA2P17301 1181 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 GJA1P17302 382 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 CCKARP32238 428 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 CAPZA2P47755 286 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ISL1P61371 349 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 SNRPEP62304 92 aaKnown RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PLIN5Q00G26 463 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ILF3Q12906 894 aaKnown RBP eCLIP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ALCAMQ13740 583 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 NR1D2Q14995 579 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 SLC39A14Q15043 492 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ZNF324BQ6AW86 544 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PRSS57Q6UWY2 283 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 UNQ6126/PRO20091Q6UXV3 157 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 DENND5BQ6ZUT9 1274 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 TUBA1AQ71U36 451 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 MUC20Q8N307 709 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 OR52I2Q8NH67 350 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 SORCS1Q8WY21 1168 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PHF21AQ96BD5 680 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PTERQ96BW5 349 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 PGAP3Q96FM1 320 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 FAM84BQ96KN1 310 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 BAG1Q99933 345 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 TUBA1CQ9BQE3 449 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 CCDC106Q9BWC9 280 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 C1QTNF4Q9BXJ3 329 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 MOV10L1Q9BXT6 1211 aaKnown RBP3.69□□□□□ -1.82
PTCD3-209ENST00000472044 CSTL1Q9H114 145 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 RABEP2Q9H5N1 569 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 FKRPQ9H9S5 495 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 TAB2Q9NYJ8 693 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 MALT1Q9UDY8 824 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 ZNF711Q9Y462 761 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 NME7Q9Y5B8 376 aa3.69□□□□□ -1.82
PTCD3-209ENST00000472044 A0A1W2PS18 150 aa3.68□□□□□ -1.82
PTCD3-209ENST00000472044 ASPDHA6ND91 283 aa3.68□□□□□ -1.82
PTCD3-209ENST00000472044 C5orf60A6NFR6 353 aa3.68□□□□□ -1.82
PTCD3-209ENST00000472044 A8MXE2 369 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms