RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RHNO1Q9BSD3 238 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM39BQ9GZU3 492 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 RAD21L1Q9H4I0 556 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ERVMER34-1Q9H9K5 563 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 FGF22Q9HCT0 170 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 RRP7BPQ9NSQ0 103 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 INTS10Q9NVR2 710 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 MTMR10Q9NXD2 777 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PTTG2Q9NZH5 202 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 RCC2Q9P258 522 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 DNAJB4Q9UDY4 337 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 GTF2A1LQ9UNN4 478 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 KCNJ14Q9UNX9 436 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 MRPS28Q9Y2Q9 187 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 FLT1P17948 1338 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 STK36Q9NRP7 1315 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF318Q5VUA4 2279 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TDRD15B5MCY1 1934 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MYH15Q9Y2K3 1946 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TEX13DA0A0J9YY54 714 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 NDUFAF8A1L188 74 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 OR2M5A3KFT3 312 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM8BA6NDV4 472 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 C15orf62A8K5M9 175 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 KRTAP16-1A8MUX0 517 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM189-UBE2V1I3L0A0 370 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PLOD2O00469 737 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TCERG1O14776 1098 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ZBTB43O43298 467 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ARHGEF9O43307 516 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TPD52L2O43399 206 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 GPR137BO60478 399 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CRLF1O75462 422 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CSPG5O95196 566 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 GCNT3O95395 438 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 NADKO95544 446 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TBX18O95935 607 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 EIF2S1P05198 315 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TPOP07202 933 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CEACAM1P13688 526 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 SELLP14151 372 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF26P17031 533 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CKMT2P17540 419 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ANXA7P20073 488 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CBLP22681 906 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ITGA3P26006 1051 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 EPHA2P29317 976 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MSH2P43246 934 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 LUMP51884 338 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 THOP1P52888 689 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 GALCP54803 685 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 NIPAL4Q0D2K0 466 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 UBE2V1Q13404 147 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 EIF4A2Q14240 407 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM187Q14656 261 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MED22Q15528 200 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MEP1AQ16819 746 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ASTE1Q2TB18 679 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 GTDC1Q4AE62 458 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 LCE3EQ5T5B0 92 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ARHGEF16Q5VV41 709 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ALS2CLQ60I27 953 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM198Q66K66 360 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 NCEH1Q6PIU2 408 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CFAP77Q6ZQR2 320 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 STXBP4Q6ZWJ1 553 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF534Q76KX8 674 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PXKQ7Z7A4 578 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CPLX4Q7Z7G2 160 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 HACE1Q8IYU2 909 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 CRYBG2Q8N1P7 616 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PCYOX1LQ8NBM8 494 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 HJURPQ8NCD3 748 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 DDHD1Q8NEL9 900 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 IL17REQ8NFR9 667 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 GSDMBQ8TAX9 411 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 SEMA4DQ92854 862 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ARHGEF2Q92974 986 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ANKRD9Q96BM1 317 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF653Q96CK0 615 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TBATAQ96M53 351 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ATOH8Q96SQ7 321 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 SEC62Q99442 399 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 HGH1Q9BTY7 390 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 WDR13Q9H1Z4 485 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 SEMA6AQ9H2E6 1030 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PDCL3Q9H2J4 239 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF71Q9NQZ8 489 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MBNL1Q9NR56 388 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 SETD4Q9NVD3 440 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 MIOSQ9NXC5 875 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 EHD2Q9NZN4 543 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM181Q9P2C4 612 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PGAP2Q9UHJ9 254 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 DBNLQ9UJU6 430 aaKnown RBP1.3□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM98Q9Y2Y6 226 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PYGO1Q9Y3Y4 419 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 YIPF1Q9Y548 306 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PRAG1Q86YV5 1406 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms