RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 TCEAL3Q969E4 200 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 PDXPQ96GD0 296 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 CDKN2AIPNLQ96HQ2 116 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 DNAJC1Q96KC8 554 aaKnown RBP3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SIGLEC10Q96LC7 697 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 TTC25Q96NG3 672 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 OR2M4Q96R27 311 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 KRT12Q99456 494 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 COPS8Q99627 209 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 APOL2Q9BQE5 337 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 TIMM29Q9BSF4 260 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 FAM167BQ9BTA0 163 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 LRRC61Q9BV99 259 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 BOCQ9BWV1 1114 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 LGR4Q9BXB1 951 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SPATA16Q9BXB7 569 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 GSDMCQ9BYG8 508 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SLC32A1Q9H598 525 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 VPS37BQ9H9H4 285 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 FGF22Q9HCT0 170 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 FZD3Q9NPG1 666 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 WASH6PQ9NQA3 447 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 CHRAC1Q9NRG0 131 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 DNAJC28Q9NX36 388 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SMARCAL1Q9NZC9 954 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SAMD15Q9P1V8 674 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 KLHL42Q9P2K6 505 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
TRIM59-202ENST00000468542 RAPGEFL1Q9UHV5 662 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 CNOT6Q9ULM6 557 aaKnown RBP3.48□□□□□ -1.85
TRIM59-202ENST00000468542 COQ6Q9Y2Z9 468 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 OR1A2Q9Y585 309 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 PCDHGA1Q9Y5H4 931 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 GPC6Q9Y625 555 aaPredicted RBP3.48□□□□□ -1.85
TRIM59-202ENST00000468542 ARL5AQ9Y689 179 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.48□□□□□ -1.85
TRIM59-202ENST00000468542 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
TRIM59-202ENST00000468542 TPRP12270 2363 aaKnown RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CELSR3Q9NYQ7 3312 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 KIR2DS5A0A0G2JLQ3 304 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 A0A0G2JNG1 304 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ZCWPW2A0A1B0GU75 182 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TCRBV7S3A2A0A539 114 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 A6NCN8 305 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 MGAT4DA6NG13 374 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 OR5K4A6NMS3 321 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 C4orf47A7E2U8 309 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 A8MX80 341 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 F5H423 210 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 KIR2DS3K7RE56 304 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 EIF3FO00303 357 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CDK2AP1O14519 115 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 KPNA5O15131 536 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 KMOO15229 486 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ZW10O43264 779 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 GRID2O43424 1007 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 RAD51CO43502 376 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TNFSF14O43557 240 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 NUDT21O43809 227 aaKnown RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 DNAJC6O75061 913 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TRIM16O95361 564 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TNFP01375 233 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 FTH1P02794 183 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ESR1P03372 595 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TUBBP07437 444 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ANXA6P08133 673 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 GIMD1P0DJR0 217 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CKMT1AP12532 417 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ATP1B2P14415 290 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ZNF7P17097 686 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CKMT2P17540 419 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TPH1P17752 444 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CD9P21926 228 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ACRV1P26436 265 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 MGAT1P26572 445 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ATP5DP30049 168 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 MC4RP32245 332 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 FOXN2P32314 431 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 SOX11P35716 441 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 MAPK9P45984 424 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 GPR3P46089 330 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 RPL21P46778 160 aaKnown RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 FASLGP48023 281 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 PRLHRP49683 370 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 VPS41P49754 854 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 DUSP3P51452 185 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ARSDP51689 593 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 ITGA8P53708 1063 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 SESN2P58004 480 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 TMEM115Q12893 351 aaPredicted RBP3.47□□□□□ -1.85
TRIM59-202ENST00000468542 RPA4Q13156 261 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 SQSTM1Q13501 440 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 OLIG2Q13516 323 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CUL1Q13616 776 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 GTF2H3Q13889 308 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 SEPT6Q14141 434 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 CRYMQ14894 314 aa3.47□□□□□ -1.85
TRIM59-202ENST00000468542 KIR2DS5Q14953 304 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms