RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RASSF9O75901 435 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 VCLP18206 1134 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 HLA-DPA1P20036 260 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 RBL1P28749 1068 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 CCR10P46092 362 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 OLIG2Q13516 323 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 NFE2L1Q14494 772 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 CACHD1Q5VU97 1274 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 C11orf63Q6NUN7 778 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 TMEM220Q6QAJ8 160 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 BBS12Q6ZW61 710 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 PRSS42Q7Z5A4 293 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 AMZ2Q86W34 360 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 KLHL6Q8WZ60 621 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 STARD8Q92502 1023 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 TRIT1Q9H3H1 467 aaKnown RBP24■■□□□ 1.43
PTCH1-210ENST00000468211 RPS6KL1Q9Y6S9 549 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 HACD1B0YJ81 288 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 CSRP3P50461 194 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 DMPKQ09013 629 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 MAP7Q14244 749 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 RPE65Q16518 533 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 LDLRAP1Q5SW96 308 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 ZDHHC20Q5W0Z9 365 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 IRGCQ6NXR0 463 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 RBM12BQ8IXT5 1001 aaKnown RBP23.99■■□□□ 1.43
PTCH1-210ENST00000468211 ESX1Q8N693 406 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 BEND7Q8N7W2 519 aaPredicted RBP23.99■■□□□ 1.43
PTCH1-210ENST00000468211 GALNT6Q8NCL4 622 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 RBM41Q96IZ5 413 aaKnown RBP23.99■■□□□ 1.43
PTCH1-210ENST00000468211 CATSPER2Q96P56 530 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 FICDQ9BVA6 458 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 EPHA6Q9UF33 1036 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 TRHDEQ9UKU6 1024 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 KCTD3Q9Y597 815 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 ARL5AQ9Y689 179 aa23.99■■□□□ 1.43
PTCH1-210ENST00000468211 TNNT3P45378 269 aaPredicted RBP23.98■■□□□ 1.43
PTCH1-210ENST00000468211 DEFB109BQ30KR1 87 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 C16orf46Q6P387 395 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 SARM1Q6SZW1 724 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 EFHD1Q9BUP0 239 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 FSD1LQ9BXM9 530 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 RAB33BQ9H082 229 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 GBA3Q9H227 469 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTCH1-210ENST00000468211 PKP3Q9Y446 797 aa23.98■■□□□ 1.43
PTCH1-210ENST00000468211 HECTD1Q9ULT8 2610 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 IGHV5-51A0A0C4DH38 117 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 RCCD1A6NED2 376 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 H7C0C1 242 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 APOC4-APOC2K7ER74 178 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 KCNJ13O60928 360 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 KIAA0754O94854 1291 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 TIAF1O95411 115 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 APOC2P02655 101 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 FECHP22830 423 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 PBLDP30039 288 aaPredicted RBP23.97■■□□□ 1.43
PTCH1-210ENST00000468211 HALP42357 657 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 ATP5OP48047 213 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 XRCC4Q13426 336 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 IL11RAQ14626 422 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 FNBP1LQ5T0N5 605 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 C6orf15Q6UXA7 325 aaPredicted RBP23.97■■□□□ 1.43
PTCH1-210ENST00000468211 DET1Q7L5Y6 550 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 DAAM2Q86T65 1068 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 ZNF398Q8TD17 642 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 ZDHHC12Q96GR4 267 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 FAM118BQ9BPY3 351 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 APOL2Q9BQE5 337 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 TRIM5Q9C035 493 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 ZCCHC2Q9C0B9 1178 aaKnown RBP23.97■■□□□ 1.43
PTCH1-210ENST00000468211 SMOXQ9NWM0 555 aa23.97■■□□□ 1.43
PTCH1-210ENST00000468211 CFAP20Q9Y6A4 193 aaKnown RBP23.97■■□□□ 1.43
PTCH1-210ENST00000468211 STX7O15400 261 aaKnown RBP23.96■■□□□ 1.43
PTCH1-210ENST00000468211 NDUFA10O95299 355 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 FGF5P12034 268 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 NELFEP18615 380 aaKnown RBP23.96■■□□□ 1.43
PTCH1-210ENST00000468211 ADRA1AP35348 466 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 DLSTP36957 453 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 ITGA9Q13797 1035 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 KCNAB1Q14722 419 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 RANBP10Q6VN20 620 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 CERS6Q6ZMG9 384 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 RASGRP3Q8IV61 690 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 ACTL9Q8TC94 416 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 ZNF71Q9NQZ8 489 aaPredicted RBP23.96■■□□□ 1.43
PTCH1-210ENST00000468211 SEMA5BQ9P283 1151 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 TUBD1Q9UJT1 453 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 CROTQ9UKG9 612 aa23.96■■□□□ 1.43
PTCH1-210ENST00000468211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.96■■□□□ 1.43
PTCH1-210ENST00000468211 DNMT3AQ9Y6K1 912 aaPredicted RBP23.96■■□□□ 1.43
PTCH1-210ENST00000468211 SPAG6O75602 509 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 PRAMEF1O95521 474 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 TCN2P20062 427 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 GEMP55040 296 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 OTUD4Q01804 1114 aaKnown RBP23.95■■□□□ 1.42
PTCH1-210ENST00000468211 SKIDA1Q1XH10 827 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 METRNLQ641Q3 311 aa23.95■■□□□ 1.42
PTCH1-210ENST00000468211 DUS1LQ6P1R4 473 aaKnown RBP23.95■■□□□ 1.42
PTCH1-210ENST00000468211 MICALCLQ6ZW33 695 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms