RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MTSS1O43312 755 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 PSTPIP1O43586 416 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 KATNA1O75449 491 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 PBLDP30039 288 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-207ENST00000467819 CA5AP35218 305 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 CTSCP53634 463 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 SEPT6Q14141 434 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 ZDHHC20Q5W0Z9 365 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 PID1Q7Z2X4 250 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 AMZ2Q86W34 360 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 ZNF567Q8N184 647 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 RASGEF1AQ8N9B8 481 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 KLHL6Q8WZ60 621 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 P3H4Q92791 437 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 HACD3Q9P035 362 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 ANAPC2Q9UJX6 822 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 INTUQ9ULD6 942 aa20.65■□□□□ 0.9
COL9A3-207ENST00000467819 RELNP78509 3460 aa20.64■□□□□ 0.9
COL9A3-207ENST00000467819 GLYATL1P3A0A0U1RQE8 302 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 OR2AG2A6NM03 316 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 SPAG6O75602 509 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 POP7O75817 140 aaKnown RBP20.64■□□□□ 0.89
COL9A3-207ENST00000467819 FGF5P12034 268 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 CASRP41180 1078 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 ERV3-1Q14264 604 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 TCEAL1Q15170 157 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 SLC1A5Q15758 541 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 CRTC2Q53ET0 693 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-207ENST00000467819 COLEC12Q5KU26 742 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 LDLRAP1Q5SW96 308 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 TMEM220Q6QAJ8 160 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 FAM83HQ6ZRV2 1179 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-207ENST00000467819 PPP1R3BQ86XI6 285 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 FCRL5Q96RD9 977 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 EPHA6Q9UF33 1036 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 PKP3Q9Y446 797 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 KCTD3Q9Y597 815 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 ALG6Q9Y672 507 aa20.64■□□□□ 0.89
COL9A3-207ENST00000467819 LRRK2Q5S007 2527 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 IGHV5-51A0A0C4DH38 117 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 EPOP01588 193 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 FURINP09958 794 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 NELFEP18615 380 aaKnown RBP20.63■□□□□ 0.89
COL9A3-207ENST00000467819 HLA-DPA1P20036 260 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 FECHP22830 423 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 DMPKQ09013 629 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 NFE2L1Q14494 772 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 PLCL1Q15111 1095 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 RPE65Q16518 533 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 LACTB2Q53H82 288 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-207ENST00000467819 TFDP3Q5H9I0 405 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 GPRC6AQ5T6X5 926 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 SIDT2Q8NBJ9 832 aaKnown RBP20.63■□□□□ 0.89
COL9A3-207ENST00000467819 DDHD1Q8NEL9 900 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 QKIQ96PU8 341 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL9A3-207ENST00000467819 FSD1LQ9BXM9 530 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 RAB33BQ9H082 229 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL9A3-207ENST00000467819 RSPH14Q9UHP6 348 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 KCNMB2Q9Y691 235 aa20.63■□□□□ 0.89
COL9A3-207ENST00000467819 hCG_1818297A0A087WSY0 165 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 GAPDHSO14556 408 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-207ENST00000467819 KCNJ13O60928 360 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 TIAF1O95411 115 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 CCNYL3P0C7X3 344 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 NR1D1P20393 614 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 PTMSP20962 102 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 AKT1P31749 480 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 MARCKSL1P49006 195 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 MPP3Q13368 585 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 TUBB3Q13509 450 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 ITGA9Q13797 1035 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 KCNAB1Q14722 419 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 PTPRCAPQ14761 206 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 IGFBP7Q16270 282 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL9A3-207ENST00000467819 DET1Q7L5Y6 550 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 CNGA4Q8IV77 575 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 DTX3LQ8TDB6 740 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 VAT1Q99536 393 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 IMP3Q9NV31 184 aaKnown RBP20.62■□□□□ 0.89
COL9A3-207ENST00000467819 KCND3Q9UK17 655 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 TP53TG5Q9Y2B4 290 aa20.62■□□□□ 0.89
COL9A3-207ENST00000467819 CFAP20Q9Y6A4 193 aaKnown RBP20.62■□□□□ 0.89
COL9A3-207ENST00000467819 SPENQ96T58 3664 aaKnown RBP20.62■□□□□ 0.89
COL9A3-207ENST00000467819 TNRC6AQ8NDV7 1962 aaKnown RBP20.61■□□□□ 0.89
COL9A3-207ENST00000467819 CDC14CA4D256 554 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 GOLGA6L3A6NEY3 463 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 AKR1B15C9JRZ8 316 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-207ENST00000467819 XRCC4Q13426 336 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 DNASE1L3Q13609 305 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 FNBP1LQ5T0N5 605 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 CYB5D1Q6P9G0 228 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 TMEM135Q86UB9 458 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 KATNAL2Q8IYT4 538 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 BEND7Q8N7W2 519 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-207ENST00000467819 RNF214Q8ND24 703 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 CT55Q8WUE5 264 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 NAT14Q8WUY8 206 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms