RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RPS7P62081 194 aaKnown RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 SEMG2Q02383 582 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 MYLK3Q32MK0 819 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 TPRG1Q6ZUI0 275 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 UBR7Q8N806 425 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 ROPN1LQ96C74 230 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 NMD3Q96D46 503 aaKnown RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PGAP3Q96FM1 320 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 IMP4Q96G21 291 aaKnown RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 HBEGFQ99075 208 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 MUC13Q9H3R2 512 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CCDC177Q9NQR7 707 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 USE1Q9NZ43 259 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 GJB5O95377 273 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CST1P01037 141 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PRPS2P11908 318 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 GNAZP19086 355 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 NCF4Q15080 339 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RAB6CQ53S08 254 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PM20D1Q6GTS8 502 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 TMEM130Q8N3G9 435 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PEX13Q92968 403 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CEP295NLQ96MC4 621 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RAB6CQ9H0N0 254 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 MTRRQ9UBK8 725 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 MYO9BQ13459 2157 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 A0A0D9SEW6 157 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF840PA6NDX5 716 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PRKCGP05129 697 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 LRRC73Q5JTD7 316 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RBM20Q5T481 1227 aaKnown RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 GALNT13Q8IUC8 556 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RORBQ92753 470 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PHF21AQ96BD5 680 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 ADH5P11766 374 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 PSMB9P28065 219 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 PDK3Q15120 406 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 PLA2G4EQ3MJ16 856 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 ARMC3Q5W041 872 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 Q6ZVU0 165 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 ADCY4Q8NFM4 1077 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 LPGAT1Q92604 370 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 GLMNQ92990 594 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 OSBPL11Q9BXB4 747 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 GSAPA4D1B5 854 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 A8MUI8 341 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 ITM2AO43736 263 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 NR2F1P10589 423 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 SLC6A2P23975 617 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 TRPC1P48995 793 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 RALGDSQ12967 914 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 LAPTM5Q13571 262 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 SF1Q15637 639 aaKnown RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 ARSIQ5FYB1 569 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 GLYATQ6IB77 296 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 FAM171BQ6P995 826 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 RTP4Q96DX8 246 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 RAD9AQ99638 391 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 KCTD3Q9Y597 815 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 hCG_2014768A0A024R1R8 64 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 DNAJA2O60884 412 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 GSSP48637 474 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 DEFA1P59665 94 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 DEFA3P59666 94 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 CHRNA6Q15825 494 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 LRRTM3Q86VH5 581 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 C2CD4AQ8NCU7 369 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 SRFBP1Q8NEF9 429 aaKnown RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 FAM192AQ9GZU8 254 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 C1orf109Q9NX04 203 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 NENFQ9UMX5 172 aa13.62□□□□□ -0.23
BRAT1-203ENST00000467558 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
BRAT1-203ENST00000467558 LEFTY2O00292 366 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MAN1A2O60476 641 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MAFKO60675 156 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 RFPL1O75677 317 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PCCBP05166 539 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TYRP14679 529 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SYN1P17600 705 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 FSHRP23945 695 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 NRG1Q02297 640 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PLEKHG6Q3KR16 790 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 CST9Q5W186 159 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TMEM135Q86UB9 458 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 GLB1L3Q8NCI6 653 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 OR2T34Q8NGX1 318 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 OR2T3Q8NH03 318 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms