RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 INTS12Q96CB8 462 aaKnown RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 SEPT5Q99719 369 aaPredicted RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 RTP3Q9BQQ7 232 aa2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 SYT11Q9BT88 431 aa2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 RANBP17Q9H2T7 1088 aaKnown RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 PELI2Q9HAT8 420 aa2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 RANGRFQ9HD47 186 aaPredicted RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 WASH6PQ9NQA3 447 aa2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 MBNL1Q9NR56 388 aaKnown RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 COQ3Q9NZJ6 369 aa2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 RCC2Q9P258 522 aaKnown RBP2.6□□□□□ -1.99
GTF3C3-209ENST00000466862 ARHGEF40Q8TER5 1519 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PI15O43692 258 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 GPR137BO60478 399 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 NGFP01138 241 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 KRT19P08727 400 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 ANXA7P20073 488 aaKnown RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PBX3P40426 434 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 RGS2P41220 211 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PRCPP42785 496 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 SNX16P57768 344 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 RPL7AP62424 266 aaKnown RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 TMEM115Q12893 351 aaPredicted RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 ADIPOQQ15848 244 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 SNAI3Q3KNW1 292 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 TCTE1Q5JU00 501 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 RNF168Q8IYW5 571 aaPredicted RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 ZNF611Q8N823 705 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 ANKRD52Q8NB46 1076 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 TMEM116Q8NCL8 245 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 METTL6Q8TCB7 284 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PPP4R1Q8TF05 950 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 ZNRF4Q8WWF5 429 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 C18orf12Q96KH6 178 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PKP2Q99959 881 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 RHNO1Q9BSD3 238 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 CHMP4AQ9BY43 222 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PAIP1Q9H074 479 aaKnown RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 EPB41L5Q9HCM4 733 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 RPS10P5Q9NQ39 176 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 CCDC177Q9NQR7 707 aaPredicted RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 PLCXD1Q9NUJ7 323 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 TRMT1Q9NXH9 659 aaKnown RBP2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 TAS2R10Q9NYW0 307 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 LUZP4Q9P127 313 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 YIPF1Q9Y548 306 aa2.59□□□□□ -1.99
GTF3C3-209ENST00000466862 IGHV4-61A0A0C4DH41 118 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 SH2B2O14492 632 aaPredicted RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 PEX14O75381 377 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 AP2A2O94973 939 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 CAVIN2O95810 425 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 IGHV4-59P01825 116 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 GATA2P23769 480 aaPredicted RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 KRTAP12-2P59991 146 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 FRG1Q14331 258 aaKnown RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 DPCR1Q3MIW9 517 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 GTDC1Q4AE62 458 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 ALS2CLQ60I27 953 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 CYP20A1Q6UW02 462 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 Q6ZSR9 355 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 ZNF534Q76KX8 674 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 HEATR4Q86WZ0 1026 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 ARMC8Q8IUR7 673 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 ZNF614Q8N883 585 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 OR2T6Q8NHC8 308 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 OLIG1Q8TAK6 271 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 SLC22A12Q96S37 553 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 SEMA3CQ99985 751 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 TMEM39BQ9GZU3 492 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 POLR1BQ9H9Y6 1135 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 INTS10Q9NVR2 710 aaKnown RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 PDP2Q9P2J9 529 aa2.58□□□□□ -2
GTF3C3-209ENST00000466862 EXOGQ9Y2C4 368 aaKnown RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 LRRFIP2Q9Y608 721 aaKnown RBP2.58□□□□□ -2
GTF3C3-209ENST00000466862 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 A0A087WW49 117 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 TMEM8BA6NDV4 472 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 C15orf62A8K5M9 175 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 EIF3CLB5ME19 914 aaKnown RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 PLOD2O00469 737 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 SMAD9O15198 467 aaKnown RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 TRMUO75648 421 aaKnown RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 IPO7O95373 1038 aaKnown RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 BMP10O95393 424 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 MOCS3O95396 460 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 RAF1P04049 648 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 CEBPBP17676 345 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 CBLP22681 906 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 NFKBIAP25963 317 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 CSRP3P50461 194 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 RARSP54136 660 aaKnown RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 CCNG2Q16589 344 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 FAM109BQ6ICB4 259 aaPredicted RBP2.57□□□□□ -2
GTF3C3-209ENST00000466862 IL27RAQ6UWB1 636 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 GSTA5Q7RTV2 222 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 CEP97Q8IW35 865 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 CRYBG2Q8N1P7 616 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 ESX1Q8N693 406 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 L3MBTL4Q8NA19 623 aa2.57□□□□□ -2
GTF3C3-209ENST00000466862 OR2T11Q8NH01 316 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms