RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 AMZ2Q86W34 360 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 RASGRP3Q8IV61 690 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 RCOR2Q8IZ40 523 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 RASGEF1AQ8N9B8 481 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 ELMO2Q96JJ3 720 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 FSD1LQ9BXM9 530 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 UGT1A7Q9HAW7 530 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 UGT1A10Q9HAW8 530 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 UGT1A8Q9HAW9 530 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 PKP3Q9Y446 797 aa18.79■□□□□ 0.6
COL9A3-206ENST00000466532 MRPS18BQ9Y676 258 aaKnown RBP18.79■□□□□ 0.6
COL9A3-206ENST00000466532 HACD1B0YJ81 288 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 POP7O75817 140 aaKnown RBP18.78■□□□□ 0.6
COL9A3-206ENST00000466532 CA5AP35218 305 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 DLSTP36957 453 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 CTSCP53634 463 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 DMPKQ09013 629 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 ITGA9Q13797 1035 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 GPRC6AQ5T6X5 926 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 ATP1A1-AS1Q5TC04 95 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 TMEM220Q6QAJ8 160 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 C6orf15Q6UXA7 325 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-206ENST00000466532 GALNT6Q8NCL4 622 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 DDHD1Q8NEL9 900 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 GPR150Q8NGU9 434 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 KLHL6Q8WZ60 621 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 STAMBPL1Q96FJ0 436 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 RBM41Q96IZ5 413 aaKnown RBP18.78■□□□□ 0.6
COL9A3-206ENST00000466532 RAB33BQ9H082 229 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 EPHA6Q9UF33 1036 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 TRHDEQ9UKU6 1024 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 PSMD13Q9UNM6 376 aa18.78■□□□□ 0.6
COL9A3-206ENST00000466532 OR2AG2A6NM03 316 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 KIAA0754O94854 1291 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 NDUFA10O95299 355 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 FGF5P12034 268 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 FECHP22830 423 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 F8A1P23610 371 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 TLE1Q04724 770 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 FAM83HQ6ZRV2 1179 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-206ENST00000466532 C9orf43Q8TAL5 461 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-206ENST00000466532 APOBEC4Q8WW27 367 aaKnown RBP18.77■□□□□ 0.6
COL9A3-206ENST00000466532 HEMGNQ9BXL5 484 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 LNPEPQ9UIQ6 1025 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 CROTQ9UKG9 612 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 TFR2Q9UP52 801 aa18.77■□□□□ 0.6
COL9A3-206ENST00000466532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL9A3-206ENST00000466532 PIKFYVEQ9Y2I7 2098 aa18.77■□□□□ 0.59
COL9A3-206ENST00000466532 H7C0C1 242 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 GAPDHSO14556 408 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 STX7O15400 261 aaKnown RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 LCA5LO95447 670 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PBLDP30039 288 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 AKT1P31749 480 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 ATP5OP48047 213 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PPP1CAP62136 330 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 NFE2L1Q14494 772 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PTPRCAPQ14761 206 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 RPE65Q16518 533 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 CRTC2Q53ET0 693 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 C11orf63Q6NUN7 778 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 CYB5D1Q6P9G0 228 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 BBS12Q6ZW61 710 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PPP1R3BQ86XI6 285 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 TC2NQ8N9U0 490 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 KRT35Q92764 455 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 FICDQ9BVA6 458 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 C10orf88Q9H8K7 445 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 ZNF71Q9NQZ8 489 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 SMOXQ9NWM0 555 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PCDHB3Q9Y5E6 796 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 PCDHA13Q9Y5I0 950 aa18.76■□□□□ 0.59
COL9A3-206ENST00000466532 DNMT3AQ9Y6K1 912 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-206ENST00000466532 APOC4-APOC2K7ER74 178 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 SPAG6O75602 509 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 PRAMEF1O95521 474 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 AGTP01019 485 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 APOC2P02655 101 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 NELFEP18615 380 aaKnown RBP18.75■□□□□ 0.59
COL9A3-206ENST00000466532 MSH3P20585 1137 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 RBL1P28749 1068 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 GEMP55040 296 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 XRCC4Q13426 336 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 PLCL1Q15111 1095 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 LONRF2Q1L5Z9 754 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 SKIDA1Q1XH10 827 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 FNBP1LQ5T0N5 605 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 CCDC181Q5TID7 509 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 KLHL35Q6PF15 583 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 DET1Q7L5Y6 550 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 DAAM2Q86T65 1068 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 BEND7Q8N7W2 519 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-206ENST00000466532 ZNF398Q8TD17 642 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 ZNF514Q96K75 400 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-206ENST00000466532 GBA3Q9H227 469 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 IMP3Q9NV31 184 aaKnown RBP18.75■□□□□ 0.59
COL9A3-206ENST00000466532 ARL5AQ9Y689 179 aa18.75■□□□□ 0.59
COL9A3-206ENST00000466532 IGHV5-51A0A0C4DH38 117 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 GOLGA6L3A6NEY3 463 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms