RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PTGDR2Q9Y5Y4 395 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 LRRK1Q38SD2 2015 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 A0A1B0GTL3 188 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 FCARP24071 287 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 VIPR1P32241 457 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 NSG1P42857 185 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 SLC34A1Q06495 639 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 TGFBIQ15582 683 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 POM121L1PQ3SYA9 428 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 GPRC6AQ5T6X5 926 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ANKS6Q68DC2 871 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 SBSNQ6UWP8 590 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 MYLK4Q86YV6 388 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-205ENST00000466192 FBXW8Q8N3Y1 598 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 C1QTNF3Q9BXJ4 246 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 UNC80Q8N2C7 3258 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 UPK3BL1B0FP48 263 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 UPK3BL2E5RIL1 263 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 AZIN1O14977 448 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 FGF4P08620 206 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 CYP2A6P11509 494 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-205ENST00000466192 LCP2Q13094 533 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 HERC3Q15034 1050 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ZNF805Q5CZA5 627 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ZDHHC20Q5W0Z9 365 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 GK5Q6ZS86 529 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 HSD11B1LQ7Z5J1 315 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 GPR149Q86SP6 731 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ESAMQ96AP7 390 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 COPS8Q99627 209 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 CD274Q9NZQ7 290 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ASB1Q9Y576 335 aa18.01■□□□□ 0.47
COL9A3-205ENST00000466192 ZNF30P17039 623 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 ST8SIA6P61647 398 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 TLDC1Q6P9B6 456 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 TXNDC11Q6PKC3 985 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 C16orf89Q6UX73 402 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 LARP4Q71RC2 724 aaKnown RBP eCLIP18■□□□□ 0.471e-11■□□□□ 8.4
COL9A3-205ENST00000466192 SFTPA1Q8IWL2 248 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 ZBTB2Q8N680 514 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 SNX31Q8N9S9 440 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 ZNF483Q8TF39 744 aaPredicted RBP18■□□□□ 0.47
COL9A3-205ENST00000466192 TWIST2Q8WVJ9 160 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 NRG4Q8WWG1 115 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 NPAS2Q99743 824 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
COL9A3-205ENST00000466192 HPS4Q9NQG7 708 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 DZANK1Q9NVP4 752 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 GDE1Q9NZC3 331 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 PKD2L2Q9NZM6 624 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 PCTPQ9UKL6 214 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 POMPQ9Y244 141 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 IGLV3-16A0A075B6K0 115 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 SNX2O60749 519 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 ENO3P13929 434 aaPredicted RBP18■□□□□ 0.47
COL9A3-205ENST00000466192 MTTPP55157 894 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 ART3Q13508 389 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 TANGO2Q6ICL3 276 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 EP400NLQ6ZTU2 488 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 DDIASQ8IXT1 998 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 HMGCLL1Q8TB92 370 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 SCAMP4Q969E2 229 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 LRIG1Q96JA1 1093 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 EFCAB1Q9HAE3 211 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 CCDC167Q9P0B6 97 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 DEC1Q9P2X7 70 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 MBD1Q9UIS9 605 aaPredicted RBP18■□□□□ 0.47
COL9A3-205ENST00000466192 TMCO1Q9UM00 188 aa18■□□□□ 0.47
COL9A3-205ENST00000466192 C16orf96A6NNT2 1141 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 PIP5K1BO14986 540 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 CFLARO15519 480 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 LINC01565O15544 149 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 DGKAP23743 735 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 RGS4P49798 205 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 RALGDSQ12967 914 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 FASTKQ14296 549 aaKnown RBP17.99■□□□□ 0.47
COL9A3-205ENST00000466192 SQLEQ14534 574 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 KANK2Q63ZY3 851 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 NAIF1Q69YI7 327 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-205ENST00000466192 Q6ZVL8 140 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 ADAMTSL2Q86TH1 951 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 HIPK4Q8NE63 616 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 ZNF570Q96NI8 536 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 CDRT15Q96T59 188 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-205ENST00000466192 SPATA16Q9BXB7 569 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 AKTIPQ9H8T0 292 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 TRPV4Q9HBA0 871 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 SPATS2LQ9NUQ6 558 aaKnown RBP17.99■□□□□ 0.47
COL9A3-205ENST00000466192 NUDT4Q9NZJ9 180 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 DKK3Q9UBP4 350 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 ADAMTS6Q9UKP5 1117 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 SARDHQ9UL12 918 aa17.99■□□□□ 0.47
COL9A3-205ENST00000466192 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-205ENST00000466192 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-205ENST00000466192 PSMD12O00232 456 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-205ENST00000466192 PRDX3P30048 256 aaKnown RBP17.98■□□□□ 0.47
COL9A3-205ENST00000466192 AP2B1P63010 937 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 AGKQ53H12 422 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms