RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SMARCE1Q969G3 411 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 GIMAP5Q96F15 307 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 SCLT1Q96NL6 688 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 CCDC177Q9NQR7 707 aaPredicted RBP4.45□□□□□ -1.7
SMC4-205ENST00000465563 NAALADL1Q9UQQ1 740 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 RABGAP1Q9Y3P9 1069 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 A0A087WW49 117 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
SMC4-205ENST00000465563 SLC25A12O75746 678 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 NGFP01138 241 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 CEBPBP17676 345 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 MFAP5Q13361 173 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 CCDC190Q86UF4 302 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 AMER3Q8N944 861 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 FAM149B1Q96BN6 582 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 SLC47A1Q96FL8 570 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 EGLN2Q96KS0 407 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 AGAP3Q96P47 875 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 MAP7D2Q96T17 732 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 RCC2Q9P258 522 aaKnown RBP4.44□□□□□ -1.7
SMC4-205ENST00000465563 ASIC3Q9UHC3 531 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
SMC4-205ENST00000465563 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 IFRD1O00458 451 aaPredicted RBP4.43□□□□□ -1.7
SMC4-205ENST00000465563 MAP2K7O14733 419 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 ZBTB43O43298 467 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 DAB1O75553 588 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 HRH2P25021 359 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 CEACAM8P31997 349 aaPredicted RBP4.43□□□□□ -1.7
SMC4-205ENST00000465563 SLC6A12P48065 614 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 HARS2P49590 506 aaKnown RBP4.43□□□□□ -1.7
SMC4-205ENST00000465563 OLR1P78380 273 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 ADIPOQQ15848 244 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 SEPT14Q6ZU15 432 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 ARMC8Q8IUR7 673 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 INTS12Q96CB8 462 aaKnown RBP4.43□□□□□ -1.7
SMC4-205ENST00000465563 SEPT5Q99719 369 aaPredicted RBP4.43□□□□□ -1.7
SMC4-205ENST00000465563 PIP5K1AQ99755 562 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 FGFBP2Q9BYJ0 223 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 SCPEP1Q9HB40 452 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 EPB41L5Q9HCM4 733 aa4.43□□□□□ -1.7
SMC4-205ENST00000465563 IGHV4-4A0A075B6R2 117 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
SMC4-205ENST00000465563 RRN3P2A6NIE6 340 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 IPO7O95373 1038 aaKnown RBP4.42□□□□□ -1.7
SMC4-205ENST00000465563 EDN1P05305 212 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 XBP1P17861 261 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 NFKBIAP25963 317 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 TAS2R40P59535 323 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 SOWAHCQ53LP3 525 aaPredicted RBP4.42□□□□□ -1.7
SMC4-205ENST00000465563 XKR6Q5GH73 641 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 GPALPP1Q8IXQ4 340 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 ZNRF4Q8WWF5 429 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 SGCDQ92629 289 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 SEMA4DQ92854 862 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 RRN3Q9NYV6 651 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 TAS2R10Q9NYW0 307 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 ARHGAP26Q9UNA1 814 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 B3GALT5Q9Y2C3 310 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 ZHX2Q9Y6X8 837 aa4.42□□□□□ -1.7
SMC4-205ENST00000465563 TPD52L2O43399 206 aaKnown RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 PLPP2O43688 288 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 AP2A2O94973 939 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 RAF1P04049 648 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 ICAM3P32942 547 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 SNX16P57768 344 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 RPL7AP62424 266 aaKnown RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 TMEM115Q12893 351 aaPredicted RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 CSTF3Q12996 717 aaKnown RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 LRIF1Q5T3J3 769 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 RNF168Q8IYW5 571 aaPredicted RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 NGEFQ8N5V2 710 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 OR8K5Q8NH50 307 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 ZNF300Q96RE9 604 aaPredicted RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 SEMA6AQ9H2E6 1030 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 PELI2Q9HAT8 420 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 SLC13A4Q9UKG4 626 aa4.41□□□□□ -1.7
SMC4-205ENST00000465563 R3HDM2Q9Y2K5 976 aaKnown RBP4.41□□□□□ -1.7
SMC4-205ENST00000465563 IGHV4-61A0A0C4DH41 118 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 OR2M5A3KFT3 312 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 OR6C76A6NM76 312 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 ZNF217O75362 1048 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 IGHV4-59P01825 116 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 FRMD6-AS1P0C7T7 363 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 UBL4AP11441 157 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 CKMT2P17540 419 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 THOP1P52888 689 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 MVPQ14764 893 aaKnown RBP4.4□□□□□ -1.71
SMC4-205ENST00000465563 NAB2Q15742 525 aa4.4□□□□□ -1.71
SMC4-205ENST00000465563 CTU2Q2VPK5 515 aaKnown RBP4.4□□□□□ -1.71
SMC4-205ENST00000465563 PAIP1Q9H074 479 aaKnown RBP4.4□□□□□ -1.71
SMC4-205ENST00000465563 TGFB1I1O43294 461 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 GCNT3O95395 438 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 MOCS3O95396 460 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms