RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 IL12AP29459 219 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 OR1D2P34982 312 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CLCN7P51798 805 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 ESRRGP62508 458 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CACNG1Q06432 222 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TAF12Q16514 161 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CXorf57Q6NSI4 855 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 Q6ZSR9 355 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 ZFAND4Q86XD8 727 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 PROSER1Q86XN7 944 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 RPL10LQ96L21 214 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CEP295NLQ96MC4 621 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TMEM45AQ9NWC5 275 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 PTBP2Q9UKA9 531 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TCRBV5S2A0A599 114 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TBKBP1A7MCY6 615 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 H0Y626 953 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 BMP10O95393 424 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 HTR1EP28566 365 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CDK9P50750 372 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CAP1Q01518 475 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 NR6A1Q15406 480 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 SLC36A3Q495N2 470 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 NCEH1Q6PIU2 408 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 SLC2A7Q6PXP3 512 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 HID1Q8IV36 788 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 HBEGFQ99075 208 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 SEPHS2Q99611 448 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TANC1Q9C0D5 1861 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TIMMDC1Q9NPL8 285 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 TUBA8Q9NY65 449 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 ATXN10Q9UBB4 475 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 V9GYQ6 96 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 NBNO60934 754 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 LDLRP01130 860 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 RHOAP61586 193 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 EMX2Q04743 252 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 PTRHD1Q6GMV3 140 aaKnown RBP18.08■□□□□ 0.48
SYNE4-204ENST00000465425 SPRED1Q7Z699 444 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 NPAS4Q8IUM7 802 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 CD320Q9NPF0 282 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 DHRS7Q9Y394 339 aa18.08■□□□□ 0.48
SYNE4-204ENST00000465425 CLOCKO15516 846 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 HOXA2O43364 376 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 RPL10P27635 214 aaKnown RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 GTF2H2Q13888 395 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 SLC8B1Q6J4K2 584 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 GTF2H2CQ6P1K8 395 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 GOLGA7Q7Z5G4 137 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 SFRP1Q8N474 314 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 CARNMT1Q8N4J0 409 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 MAGEE2Q8TD90 523 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 OSCP1Q8WVF1 389 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 VPS50Q96JG6 964 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 TMEM175Q9BSA9 504 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 CLPBQ9H078 707 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 P2RY12Q9H244 342 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 RPF2Q9H7B2 306 aaKnown RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 SMPD3Q9NY59 655 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 IL17CQ9P0M4 197 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 ZNF711Q9Y462 761 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 ANKRD12Q6UB98 2062 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 ACOX3O15254 700 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 RAD51BO15315 384 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 KATNA1O75449 491 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 CD160O95971 181 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 G6PDP11413 515 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 HMOX2P30519 316 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 HMGCLP35914 325 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 RPS6KA3P51812 740 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 BIRC2Q13490 618 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 PCBP2Q15366 365 aaKnown RBP eCLIP18.07■□□□□ 0.486e-14■■■□□ 14.7
SYNE4-204ENST00000465425 CERS6Q6ZMG9 384 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 GPR141Q7Z602 305 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 DHRSXQ8N5I4 330 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 PAF1Q8N7H5 531 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 PAPD5Q8NDF8 572 aaKnown RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 TTC16Q8NEE8 873 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 OR4F6Q8NGB9 312 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 PDLIM5Q96HC4 596 aaKnown RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 NSMCE2Q96MF7 247 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 RNF145Q96MT1 663 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 BDH2Q9BUT1 245 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 OCEL1Q9H607 264 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 HEBP1Q9NRV9 189 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 MAGEL2Q9UJ55 1249 aa18.07■□□□□ 0.48
SYNE4-204ENST00000465425 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
SYNE4-204ENST00000465425 GRXCR2A6NFK2 248 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 FFAR2O15552 330 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 OTCP00480 354 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 MT-ND1P03886 318 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CNPP09543 421 aaKnown RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 ZNF7P17097 686 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CTPS1P17812 591 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms