RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CFHR1Q03591 330 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 NFATC2Q13469 925 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 ZRANB3Q5FWF4 1079 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 C6orf132Q5T0Z8 1188 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 ARHGAP40Q5TG30 622 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 ZDHHC24Q6UX98 284 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 MACC1Q6ZN28 852 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF605Q86T29 641 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 RELL1Q8IUW5 271 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 FBXO36Q8NEA4 188 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 WBP1Q96G27 269 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 PRR11Q96HE9 360 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 TCF12Q99081 682 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 FAM167BQ9BTA0 163 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 SLC13A1Q9BZW2 595 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 MBNL1Q9NR56 388 aaKnown RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 PCDHGA8Q9Y5G5 932 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 COL27A1Q8IZC6 1860 aaPredicted RBP17.22■□□□□ 0.35
CPSF4-209ENST00000465132 QSOX1O00391 747 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 TNFRSF10CO14798 259 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 YY2O15391 372 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 VEGFDO43915 354 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 ANXA6P08133 673 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 GM2AP17900 193 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 MAGEA4P43358 317 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 CARSP49589 748 aaKnown RBP17.22■□□□□ 0.35
CPSF4-209ENST00000465132 TTPAP49638 278 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 GTF2H3Q13889 308 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 NFATC4Q14934 902 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 MAP9Q49MG5 647 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF449Q6P9G9 518 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 OR13J1Q8NGT2 312 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 SNRNP27Q8WVK2 155 aaKnown RBP17.22■□□□□ 0.35
CPSF4-209ENST00000465132 CDKL2Q92772 493 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 NAT6Q93015 286 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 GLYATL1Q969I3 302 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF514Q96K75 400 aaPredicted RBP17.22■□□□□ 0.35
CPSF4-209ENST00000465132 CLPBQ9H078 707 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 RMI1Q9H9A7 625 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 CATSPERZQ9NTU4 200 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 NSMCE4AQ9NXX6 385 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 VPS18Q9P253 973 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 NFU1Q9UMS0 254 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 CHMP2BQ9UQN3 213 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 KCTD3Q9Y597 815 aa17.22■□□□□ 0.35
CPSF4-209ENST00000465132 KALRNO60229 2985 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 A0A0U1RQS6 177 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 PMS2P1A4D2B8 440 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 KLHL33A6NCF5 533 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CASC3O15234 703 aaKnown RBP17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
CPSF4-209ENST00000465132 VAPBO95292 243 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 NMBRP28336 390 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CDK3Q00526 305 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 PPARDQ03181 441 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 PEX6Q13608 980 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CRYMQ14894 314 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CHRNA6Q15825 494 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 KCTD19Q17RG1 926 aaPredicted RBP17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CYS1Q717R9 158 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 HEATR4Q86WZ0 1026 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 WDR48Q8TAF3 677 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 GSDMBQ8TAX9 411 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 MFSD3Q96ES6 412 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 WDR92Q96MX6 357 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 COPS8Q99627 209 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CCDC3Q9BQI4 270 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 C20orf96Q9NUD7 363 aaPredicted RBP17.21■□□□□ 0.35
CPSF4-209ENST00000465132 PADI4Q9UM07 663 aa17.21■□□□□ 0.35
CPSF4-209ENST00000465132 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 CCDC162PA2VCL2 907 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 AGAP14A8MT82 685 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 CDRT15L2A8MXV6 281 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 GOT2P00505 430 aaKnown RBP17.2■□□□□ 0.34
CPSF4-209ENST00000465132 MSH3P20585 1137 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 OGNP20774 298 aaKnown RBP17.2■□□□□ 0.34
CPSF4-209ENST00000465132 AKT1P31749 480 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 STX2P32856 288 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 PDX1P52945 283 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 XIAPP98170 497 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 VAC14Q08AM6 782 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 ITIH4Q14624 930 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 TRADDQ15628 312 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 MSS51Q4VC12 460 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 ATP13A5Q4VNC0 1218 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 STEAP4Q687X5 459 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
CPSF4-209ENST00000465132 TRMT10CQ7L0Y3 403 aaKnown RBP17.2■□□□□ 0.34
CPSF4-209ENST00000465132 ANKMY2Q8IV38 441 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms