RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 TTC13Q8NBP0 860 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 ZNF398Q8TD17 642 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 TBL1YQ9BQ87 522 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 WDR37Q9Y2I8 494 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 KCTD3Q9Y597 815 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 PCDHGA4Q9Y5G9 962 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 SLC30A1Q9Y6M5 507 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 COL6A6A6NMZ7 2263 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 C5orf60A6NFR6 353 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 POP7O75817 140 aaKnown RBP25.39■■□□□ 1.66
U2AF1-206ENST00000464750 MSH3P20585 1137 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 HALP42357 657 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 MC2RQ01718 297 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 LY6DQ14210 128 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 ZNF843Q8N446 348 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 CAPN6Q9Y6Q1 641 aa25.39■■□□□ 1.66
U2AF1-206ENST00000464750 SRP72O76094 671 aaKnown RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 CRTAMO95727 393 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 C9P02748 559 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 ANKRD34CP0C6C1 535 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 AMD1P17707 334 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 WT1P19544 449 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 PBLDP30039 288 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 GPR18Q14330 331 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 SPARCL1Q14515 664 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 CLCA4Q14CN2 919 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 LONRF2Q1L5Z9 754 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 FAM83HQ6ZRV2 1179 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 ARHGEF18Q6ZSZ5 1173 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 DET1Q7L5Y6 550 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 RBM12BQ8IXT5 1001 aaKnown RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 KLHDC8BQ8IXV7 354 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 OR13C4Q8NGS5 318 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 RSC1A1Q92681 617 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 NKD1Q969G9 470 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 LRRC45Q96CN5 670 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 C9orf72Q96LT7 481 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 TEFMQ96QE5 360 aaKnown RBP25.38■■□□□ 1.65
U2AF1-206ENST00000464750 CTRCQ99895 268 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 ASB8Q9H765 288 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 SLC40A1Q9NP59 571 aa25.38■■□□□ 1.65
U2AF1-206ENST00000464750 ZNF140P52738 457 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 PDE1BQ01064 536 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 KLF1Q13351 362 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 MSLNQ13421 630 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 NFE2L1Q14494 772 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 FNBP1LQ5T0N5 605 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 DENND5AQ6IQ26 1287 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 IL22RA1Q8N6P7 574 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 FAM71DQ8N9W8 422 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 RTP4Q96DX8 246 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 ZNF514Q96K75 400 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 TGM7Q96PF1 710 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 SEMA4CQ9C0C4 833 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 PSMD13Q9UNM6 376 aa25.37■■□□□ 1.65
U2AF1-206ENST00000464750 R3HDM2Q9Y2K5 976 aaKnown RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 DNMT3AQ9Y6K1 912 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-206ENST00000464750 CFAP46Q8IYW2 2715 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 RAD1O60671 282 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 CAPZBP47756 277 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 TMPRSS15P98073 1019 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 XIAPP98170 497 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 CEACAM20Q6UY09 585 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 BEND7Q8N7W2 519 aaPredicted RBP25.36■■□□□ 1.65
U2AF1-206ENST00000464750 ZSCAN1Q8NBB4 408 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 GPR150Q8NGU9 434 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 HES6Q96HZ4 224 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 ARNT2Q9HBZ2 717 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 APMAPQ9HDC9 416 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 FBXO8Q9NRD0 319 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 SIDT1Q9NXL6 827 aaKnown RBP25.36■■□□□ 1.65
U2AF1-206ENST00000464750 FEZ2Q9UHY8 353 aaPredicted RBP25.36■■□□□ 1.65
U2AF1-206ENST00000464750 CRLS1Q9UJA2 301 aa25.36■■□□□ 1.65
U2AF1-206ENST00000464750 GOLGA6L6A8MZA4 724 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 CAPN5O15484 640 aaPredicted RBP25.35■■□□□ 1.65
U2AF1-206ENST00000464750 LEPRP48357 1165 aaKnown RBP25.35■■□□□ 1.65
U2AF1-206ENST00000464750 PARP6Q2NL67 630 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 CACNA2D3Q8IZS8 1091 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 SLC35B2Q8TB61 432 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 NAT14Q8WUY8 206 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 PIEZO2Q9H5I5 2752 aa25.35■■□□□ 1.65
U2AF1-206ENST00000464750 TCRBV7S2A1N4TA0A589 114 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 METTL18O95568 372 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 GDF10P55107 478 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 RPE65Q16518 533 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 KCTD11Q693B1 232 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 ULK4Q96C45 1275 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 ZPBPQ9BS86 351 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 TMEM121Q9BTD3 319 aa25.34■■□□□ 1.65
U2AF1-206ENST00000464750 MGAT4DA6NG13 374 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 CCL22O00626 93 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 RASSF9O75901 435 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 ITGALP20701 1170 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 HADHAP40939 763 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 P3H1Q32P28 736 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 BCL7AQ4VC05 210 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 DCUN1D1Q96GG9 259 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 C19orf43Q9BQ61 176 aa25.33■■□□□ 1.65
U2AF1-206ENST00000464750 ZNF768Q9H5H4 540 aaKnown RBP25.33■■□□□ 1.65
U2AF1-206ENST00000464750 LRRC40Q9H9A6 602 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms