RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 CHST8Q9H2A9 424 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 HAUS4Q9H6D7 363 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 KCND1Q9NSA2 647 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 GPR83Q9NYM4 423 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 SEMA5BQ9P283 1151 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 MED13Q9UHV7 2174 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 CSMD1Q96PZ7 3565 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 CBX6O95503 412 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 CD48P09326 243 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 PIRTP0C851 137 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
MRPL55-224ENST00000464148 GSDMDP57764 484 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 DCDC1P59894 354 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TUBB4BP68371 445 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 RAPSNQ13702 412 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 GTF2H3Q13889 308 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 PAFAH1B3Q15102 231 aaKnown RBP13.01□□□□□ -0.33
MRPL55-224ENST00000464148 GPR19Q15760 415 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 ZRANB3Q5FWF4 1079 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 C1QL3Q5VWW1 255 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 NCBP2-AS2Q69YL0 99 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 MED25Q71SY5 747 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF571Q7Z3V5 609 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 GDAP1Q8TB36 358 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 ADAMTS17Q8TE56 1095 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 FATE1Q969F0 183 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 EID2BQ96D98 161 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TSGA13Q96PP4 275 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 GPR63Q9BZJ6 419 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 ASF1BQ9NVP2 202 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 WDR37Q9Y2I8 494 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 HIVEP3Q5T1R4 2406 aa13.01□□□□□ -0.33
MRPL55-224ENST00000464148 TLCD2A6NGC4 264 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 MMP2P08253 660 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 VAV2P52735 878 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 RRADP55042 308 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 KYNUQ16719 465 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 PLEKHN1Q494U1 663 aaPredicted RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 KHDC1Q4VXA5 237 aaKnown RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 TMTC4Q5T4D3 741 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 FAM69BQ5VUD6 431 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 D2HGDHQ8N465 521 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 TMEM102Q8N9M5 508 aaPredicted RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 SLC38A9Q8NBW4 561 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 GPR150Q8NGU9 434 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 OR8K5Q8NH50 307 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 CPT1BQ92523 772 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
MRPL55-224ENST00000464148 CLIP3Q96DZ5 547 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 TTC25Q96NG3 672 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 CD180Q99467 661 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 NLNQ9BYT8 704 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 HRASLS2Q9NWW9 162 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 TCFL5Q9UL49 500 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
MRPL55-224ENST00000464148 ANKUB1A6NFN9 424 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 LRRC10BA6NIK2 292 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 MEN1O00255 615 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.332e-7■■■■□ 21.3
MRPL55-224ENST00000464148 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 RAB40ALP0C0E4 278 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 GJC1P36383 396 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ITGA1P56199 1179 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 MYL5Q02045 173 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 CDK18Q07002 472 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 KLHL30Q0D2K2 578 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 TMEM115Q12893 351 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 DPYSL3Q14195 570 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 RPE65Q16518 533 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 HADHQ16836 314 aaKnown RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ARMC6Q6NXE6 501 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF517Q6ZMY9 492 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 AMZ2Q86W34 360 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 GLIS1Q8NBF1 620 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF501Q96CX3 271 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 SGSM3Q96HU1 749 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 BTBD6Q96KE9 485 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 SMAD5Q99717 465 aaKnown RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ILKAPQ9H0C8 392 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 MAGEE1Q9HCI5 957 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 NFKBIL1Q9UBC1 381 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-224ENST00000464148 ANAPC7Q9UJX3 599 aa12.99□□□□□ -0.33
MRPL55-224ENST00000464148 B3GNT3Q9Y2A9 372 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms