RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 F5H423 210 aaPredicted RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 POP7O75817 140 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 TJP3O95049 919 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 MAP4P27816 1152 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 MAPK9P45984 424 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 GFERP55789 205 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 EIF3EP60228 445 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 MAP7Q14244 749 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 SEPT7Q16181 437 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 PRSS42Q7Z5A4 293 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 ZNF398Q8TD17 642 aa20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 TRIT1Q9H3H1 467 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 ZNF768Q9H5H4 540 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 FEZ2Q9UHY8 353 aaPredicted RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 TLN1Q9Y490 2541 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-205ENST00000463615 POLR1CO15160 346 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 GPR39O43194 453 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 STK10O94804 968 aaKnown RBP20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 PRAMEF1O95521 474 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 DLGAP3O95886 979 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 PYGMP11217 842 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 SFTPCP11686 197 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 PSMB4P28070 264 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 HALP42357 657 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 DRG2P55039 364 aaKnown RBP20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 PDE1BQ01064 536 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 GPR18Q14330 331 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 PRPSAP1Q14558 356 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 TBR1Q16650 682 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 METRNLQ641Q3 311 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 TMEM220Q6QAJ8 160 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 TMEM139Q8IV31 216 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 NLGN4XQ8N0W4 816 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 NLGN4YQ8NFZ3 816 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 JPH3Q8WXH2 748 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 EXTL1Q92935 676 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 CXorf40BQ96DE9 158 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 SLC45A3Q96JT2 553 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 ARL5AQ9Y689 179 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 SPTA1P02549 2419 aa20.15■□□□□ 0.82
PDLIM4-205ENST00000463615 KCNN4O15554 427 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 BUD23O43709 281 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 LIFP15018 202 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 TYRP1P17643 537 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 AMD1P17707 334 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 NAP1L1P55209 391 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 XIAPP98170 497 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 ABHD18Q0P651 414 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 PTPRCAPQ14761 206 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 RPE65Q16518 533 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 LONRF2Q1L5Z9 754 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 DENND5AQ6IQ26 1287 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 DARS2Q6PI48 645 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 ACRBPQ8NEB7 543 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 ZFPM2Q8WW38 1151 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 KLHL6Q8WZ60 621 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 RSC1A1Q92681 617 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 ZDHHC12Q96GR4 267 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 LINC00615Q96LM1 132 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 EFHD1Q9BUP0 239 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 APMAPQ9HDC9 416 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 STARD5Q9NSY2 213 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 KLHL3Q9UH77 587 aa20.14■□□□□ 0.81
PDLIM4-205ENST00000463615 GOLGA6L3A6NEY3 463 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 SRP72O76094 671 aaKnown RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 CRTAMO95727 393 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 ITGB6P18564 788 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 IL11RAQ14626 422 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 BCL7AQ4VC05 210 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 CRTC2Q53ET0 693 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 FAM83HQ6ZRV2 1179 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 TIPARPQ7Z3E1 657 aaKnown RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 TTC13Q8NBP0 860 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 OR4K2Q8NGD2 314 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 CTRCQ99895 268 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 BAG1Q99933 345 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 ACSL5Q9ULC5 683 aa20.13■□□□□ 0.81
PDLIM4-205ENST00000463615 MACROD2A1Z1Q3 448 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 MGAT4DA6NG13 374 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 OR2AG2A6NM03 316 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 STK17BO94768 372 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 MSH3P20585 1137 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 LEPRP48357 1165 aaKnown RBP20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 ZNF140P52738 457 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 KLF1Q13351 362 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 KCTD11Q693B1 232 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 AADACL2Q6P093 401 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 SYCE1Q8N0S2 351 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 TXLNBQ8N3L3 684 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 BEND7Q8N7W2 519 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 OR2L2Q8NH16 312 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 CCDC110Q8TBZ0 833 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 CATSPER2Q96P56 530 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 TGM7Q96PF1 710 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 ARHGAP9Q9BRR9 750 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 ASB8Q9H765 288 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 FKBPLQ9UIM3 349 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 AMFRQ9UKV5 643 aa20.12■□□□□ 0.81
PDLIM4-205ENST00000463615 ZNF891A8MT65 544 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms